Shinella oryzae: K6301_16750
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Entry
K6301_16750 CDS
T08112
Name
(GenBank) ABC transporter ATP-binding protein
KO
K01996
branched-chain amino acid transport system ATP-binding protein
Organism
soj
Shinella oryzae
Pathway
soj02010
ABC transporters
soj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K6301_16750
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K6301_16750
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_16750
Transporters [BR:
soj02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
K6301_16750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_23
RsgA_GTPase
SMC_N
BCA_ABC_TP_C
AAA_14
AAA_16
MMR_HSR1
AAA_25
Septin
NB-ARC
RecA
AAA_33
Ploopntkinase3
AAA_22
AAA_15
Motif
Other DBs
NCBI-ProteinID:
UPA27930
LinkDB
All DBs
Position
pZ25:complement(109093..109821)
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AA seq
242 aa
AA seq
DB search
MMSDTLLSVQGVETYYGNIRALAGVDVTVQKGEIVSLIGANGAGKSTLMMTICGSPQARN
GTITFDGEDITRLPTHLIARRRIAQSPEGRRIFPRMTVYENLQMGASLDNLKYFDEDVEK
IFTLFPRLKERQSQRGGTLSGGEQQMLSIGRALMARPKLLLLDEPSLGLAPLIVKGIFDA
IKVLNKEEGLTVFLVEQNAFAALKLSDRAYVMVNGKVTMSGSGKELLANPEVRAAYLEGG
RH
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
ctgatgagcgatacgcttctcagcgtccagggcgttgaaacctattacggcaacatccgc
gcgctcgccggcgtcgatgtcacggtgcagaagggcgagatcgtcagcctcatcggcgcc
aacggtgcgggcaagtcgaccctgatgatgacgatctgcggcagcccccaggcgcgcaac
ggcaccatcaccttcgacggcgaggacatcacccgcctgccgacgcatctcatcgcgcgc
cgccgcatcgcgcagtcgccggagggacgccgcatcttcccgcgcatgaccgtctacgaa
aacctccagatgggcgcgagcctcgacaacctgaagtatttcgacgaggacgtggagaag
atcttcacgctcttcccgcgcctcaaggagcgccagtcgcagcgcggcggcacgctctcg
ggcggcgaacagcagatgctgtcgatcggccgcgcgctgatggcgcgtcccaagctcttg
cttctcgacgagccgtcgctgggcctggcgccgctgatcgtcaagggcatcttcgacgcc
atcaaggtgctgaataaggaagagggcctgaccgtgttcctcgtggagcagaacgccttt
gccgcgctcaagctgtcggaccgcgcctatgtgatggtcaacggcaaggtgacgatgagc
ggctcgggcaaggagcttctggccaatccggaagtgcgcgcggcctatctcgaaggcggc
aggcactag
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integrated database retrieval system
