Shinella oryzae: K6301_16760
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Entry
K6301_16760 CDS
T08112
Symbol
livM
Name
(GenBank) high-affinity branched-chain amino acid ABC transporter permease LivM
KO
K01998
branched-chain amino acid transport system permease protein
Organism
soj
Shinella oryzae
Pathway
soj02010
ABC transporters
soj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K6301_16760 (livM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K6301_16760 (livM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_16760 (livM)
Transporters [BR:
soj02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
K6301_16760 (livM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
DUF3382
DUF1980
DC_STAMP
Motif
Other DBs
NCBI-ProteinID:
UPA27225
LinkDB
All DBs
Position
pZ25:complement(110711..112096)
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AA seq
461 aa
AA seq
DB search
MSNISHSPESAGGNLTARALREGIFAGIVALGLFVLFVGLETTQNIRNELVLNQRWGLLA
IFVAVAAVGRFLTVAYIRPWMEARKAAAKAPAEADESFFKRNFSKIAIVALLIYPPLMVM
LFGVQGSLKWVDNFGIQILIYVMLAWGLNIVVGLAGLLDLGYVAFYAVGAYSYALLSQYF
GLSFWILLPLAGILAAFWGMILGFPVLRLKGDYLAIVTLAFGEIIRLVLINWTEVTRGTF
GVSGIPKASVFGIWSFDVSAPNNFAKAFGLPMSSAYYKIFLFYLILALALLTAYVTIRLR
RMPIGRAWEALREDEIACRSLGINTVTTKLTAFSIGAMFGGFAGSFFAVRQGFVSPESFV
FLESAIILAIVVLGGMGSLVGIAVAAVVMVGGTELLREMTFLKAIFGPDFTPELYRMLIF
GLAMVIVMVWKPRGFVGSREPTAFLKERKAVSGSFTKEGHG
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacatttcccactctcccgagagcgccggcggtaacctgacggcgcgggctctg
cgcgagggcatttttgccggtatcgtggcgcttggcctgttcgtgctcttcgtcggtctg
gagaccacgcagaacatccgcaacgagctggtgctgaaccagcgctggggcctgcttgcc
atcttcgtcgccgtcgccgccgtcgggcgcttcctcacggtcgcctatatccgtccgtgg
atggaggcccgcaaggccgccgccaaggcgccggccgaggcggacgaaagcttcttcaag
cgcaacttcagcaagatcgccatcgtcgcgctcctgatctatccgccgctgatggtcatg
ctgttcggcgtgcagggctcgctcaaatgggtcgacaatttcggcatccagatcctcatc
tacgtgatgctcgcctggggcctcaacatcgtggtgggcctggccggcctgctcgacctc
ggctacgtcgccttctatgcggtgggcgcctattcctacgcgctgctgtcgcagtatttc
gggctgtccttctggatcctgctgccgctcgccggcatcctggccgccttctggggcatg
atcctcggctttccggtgctgcgcctgaagggcgactacctcgccatcgtcacgctcgcc
ttcggtgagatcatccgcctcgtgctgatcaactggacggaagtgacgcgcggcacgttc
ggcgtctcgggcattcccaaggcctccgtcttcggcatctggtcgttcgacgtcagcgcg
ccgaacaacttcgccaaggccttcggcctgccgatgtcgtcggcctattacaagatcttc
ctgttctatctcatcctggcgctggcgctgctcaccgcctatgtcacgatccgcctgcgc
cgcatgccgatcgggcgcgcctgggaagccctgcgcgaggacgagatcgcctgccgctcg
ctcggcatcaacacggtcacgaccaagctgacggcgttttccatcggcgcgatgttcggc
ggcttcgccggctccttcttcgccgtgcgtcagggcttcgtgtcgccggaaagcttcgtc
ttcctggaatcggcgatcatcctggccatcgtggtcctcggcggcatgggctcgctcgtc
ggtattgcggttgcggccgtcgtgatggtcggcggcacggaactgctgcgcgagatgacc
ttcctcaaggccattttcggtcccgacttcacgccggaactctaccgcatgctgatcttc
ggcctcgccatggtcatcgtgatggtctggaaaccgcgtggcttcgtcggcagccgtgaa
ccgaccgccttcctgaaggaacgcaaggcggtctccggcagcttcaccaaggaaggacac
ggctga
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integrated database retrieval system
