Shinella oryzae: K6301_16950
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Entry
K6301_16950 CDS
T08112
Name
(GenBank) sugar ABC transporter substrate-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
soj
Shinella oryzae
Pathway
soj02010
ABC transporters
soj02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K6301_16950
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
K6301_16950
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_16950
Transporters [BR:
soj02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
K6301_16950
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_6
ABC_sub_bind
Bmp
Motif
Other DBs
NCBI-ProteinID:
UPA27935
LinkDB
All DBs
Position
pZ25:152878..153861
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AA seq
327 aa
AA seq
DB search
MRKIVAATLVVGVALASTAVRAEDFVVGLSWNAMDNQLPVKWQEYLLSEAKAQGEAAGIN
FKWVINVADADPARQAANIEDLINQGVNLIIARAEDDAAIGASIRAADQAGIPFITFDRP
SSTAKPTAHVGGDSYDQGKTTAEAFVELLKANGVKGECIELQGSLTDVNAMNRSKAWHEV
TDASGVVKTLVSVPTEWNPELFRSGTVNALRANPQANCMFLGSDFALPAVQSALEGAGKW
APRGEANHVWIATQDVFPEAVAAIQSKYIDLGTTYDAYAHSKEAIRVAIRVAKGEGVDCP
DNICLAKGRLATQENIGTLENLWSRAE
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaagatcgttgcggctacgctagtcgtgggcgttgcattggcaagtaccgctgtc
cgggccgaagacttcgttgtcggcctgtcttggaatgcaatggacaaccaattgcctgtg
aaatggcaggaatatctgctgtcggaagccaaggcccagggagaggcggccgggatcaac
ttcaagtgggtcattaacgtggcagacgccgatcctgcccgtcaagcggccaacatcgag
gatctcatcaatcagggcgtcaacctgatcatcgcgcgcgcggaagacgatgcggcaatc
ggcgcttcgattcgcgctgccgaccaggccggcattcccttcattacatttgatcggccg
tcgtcgaccgcgaagccgacggcgcatgtcggtggtgacagctatgatcagggcaagacc
acggcggaagccttcgtagagctcctgaaggccaacggcgtaaagggtgagtgcatcgag
ctgcaaggctctctgaccgatgtgaacgccatgaaccgttcgaaggcctggcatgaggtg
acggatgcttccggtgtggtgaagacgcttgtctcggtgcccacggaatggaatccggag
cttttccgttccgggacggtgaacgcattgcgcgccaacccgcaggcgaattgcatgttc
ctgggcagcgacttcgctctgccagcagtgcagtccgcgcttgagggcgccggcaagtgg
gcaccgcgtggcgaagcgaaccatgtctggatcgccacacaggacgtgtttccggaggcc
gtcgctgcaattcagagcaagtacatcgatctgggcacgacgtatgacgcctacgcgcat
tcgaaagaggcgatccgggtcgcgatccgggttgccaagggcgagggcgtcgattgcccg
gacaatatctgcctcgcgaagggccgacttgccacgcaggaaaatatcggcacgctggaa
aacctatggtcgcgcgccgagtga
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