Shinella oryzae: K6301_17180
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Entry
K6301_17180 CDS
T08112
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
Organism
soj
Shinella oryzae
Pathway
soj02010
ABC transporters
soj02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K6301_17180
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
K6301_17180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_17180
Transporters [BR:
soj02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
K6301_17180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
F420_oxidored
HalOD1
Motif
Other DBs
NCBI-ProteinID:
UPA27297
LinkDB
All DBs
Position
pZ25:complement(201336..202430)
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AA seq
364 aa
AA seq
DB search
MGKIWKLKTAALMLAMGLGASSAMAAESYFPECFAPWDADTKQLSAVTPREGPYRIALVN
GFTGNDWRIQMIRAAESYVKRPEIAAKVKEFTAVSVGNDVAAQIAAIENYVAAGYDAVLF
IAVNPEAFDAVIDRANQAGTLLVSFDNVVFNDNHLIVDIDHGEIAAKKAQAILDDLKAKN
ITEGKVLWVRGLQGNATEKQQTESFKKVFEGTSFEVVEVVGNWDVGTSQRVTAEAVAAHG
KFVGVANAYGSMGSIQALLDAKHPAVPFGSDTMNGAVRMLAENGFTGVAIGSSPSVSAVA
ILAAFSSFEGKQMPQRIKLPPPSLPSTDWKDGIAYFSQLPASFDTATGFKECNLLFTADE
LTAN
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaatttggaaattgaaaacggccgcgctgatgttggcgatgggccttggcgcg
tccagtgccatggcagcggaaagctattttccggagtgctttgcaccctgggacgccgat
accaaacaactgtctgccgtaacgccgcgcgaaggcccgtaccgcatcgcgctggtcaac
ggctttactggcaacgattggcgcatccagatgatccgcgctgcggagtcctacgttaag
cgcccggagattgcagcgaaggtgaaggaattcaccgccgtcagcgtcggcaacgacgtc
gcggcacagattgcggcgatcgagaattacgttgcagccggctatgatgcggtgctgttc
atcgccgtcaacccggaggcgttcgacgccgtgatcgaccgtgccaaccaggcaggaaca
cttctcgtttccttcgacaatgtcgtcttcaacgacaaccacctcattgtcgatatcgac
catggcgaaatcgctgccaagaaggcgcaggccattctcgacgacctgaaggcgaagaac
atcaccgagggcaaggtgctctgggtgcgtggcctgcagggaaatgcaacggagaagcag
cagacggaaagcttcaagaaggtattcgaggggacgtcctttgaggtggtcgaagtcgtc
gggaactgggatgtcggcacatcgcagcgcgtgactgcggaagcggttgcggcgcacggc
aaatttgttggcgttgccaatgcctatggcagtatggggtcgatccaggccctgctcgac
gccaagcatcccgccgtgcctttcggttcggacacgatgaacggcgccgtgcgcatgctc
gccgaaaacggcttcaccggcgttgcgatcggatcctcaccgtcggtttcggcagtggcc
attctcgccgccttctcaagcttcgagggaaaacagatgccacagcgcatcaagctcccg
ccaccgtcgctgccgtcgacggactggaaggacggcattgcctatttctcgcaacttccg
gcttccttcgacaccgcgacgggtttcaaggaatgcaaccttctcttcactgcggatgaa
ctgaccgccaattga
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integrated database retrieval system
