Shinella oryzae: K6301_17250
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Entry
K6301_17250 CDS
T08112
Symbol
choX
Name
(GenBank) choline ABC transporter substrate-binding protein
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
soj
Shinella oryzae
Pathway
soj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K6301_17250 (choX)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_17250 (choX)
Transporters [BR:
soj02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
K6301_17250 (choX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
Motif
Other DBs
NCBI-ProteinID:
UPA27308
LinkDB
All DBs
Position
pZ25:214840..215790
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AA seq
316 aa
AA seq
DB search
MNRKVFAMIVAAGVACPMQTQMAFAGEAEACKAVRLSDLGWTDIALTNTTAELILGALGY
EPSQTLLALNITFDSLRSGDIDVFLGNWRPVQDIDYKPYFDDGSVIPVVTNLTGAKYTLA
VPRYVHDAGLKSFDDLQRFADRLDHKIYGIEPGSNKPLLDMVEKKAHGLDGTWEVVESSE
AAMLTQVQRAVETNAWIVFLGWQPHPMNVTMDMAYLAGGDAEFGPDFGGATVRTIVRKGY
PEQCPNVTKLFSNLVFDIDYENAGMSMIMTDGLEARDAAIKMLKANPQKLDAWLKDVQTL
DGKPGLAAVKAELDIQ
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggaaagttttcgcgatgatcgtcgccgcgggcgtggcgtgtccaatgcagacc
cagatggcgtttgccggtgaggccgaggcatgcaaagcggtgcgtctctcagaccttggc
tggacggacatcgccttgaccaacaccaccgccgaactcattctgggcgccttaggatat
gagcccagccagacgcttctcgccctcaatatcacgttcgattccctgcggagcggtgat
atcgatgtgttcttgggcaactggaggccggtgcaggacatcgactacaagccctatttc
gacgatggctcggtcattcccgtcgtgacaaacctgacgggagcgaaatacaccctggca
gtgcccagatatgtccacgacgcaggtttgaagtcgttcgacgatttgcagcgatttgca
gaccggcttgatcacaagatttacggcatcgagcccggatccaacaaaccgctgctcgac
atggtcgaaaagaaggcccacggactggatggtacttgggaggttgttgagtccagcgaa
gcggcaatgctgacacaagtgcagcgcgccgtcgaaacgaacgcgtggatcgtcttcctc
ggctggcagccgcatccgatgaatgtcaccatggacatggcctatctggcaggcggggac
gcggaattcggacccgatttcggcggtgccacggtgcgcacgatcgtccgaaagggctat
cccgaacagtgccccaacgtgacgaagctcttcagcaacctcgtcttcgacatagattac
gagaacgccggcatgagcatgatcatgacagacggactggaagcgcgcgacgccgcgatc
aagatgctgaaggccaacccgcagaagctcgatgcctggctcaaggatgtgcagacgtta
gacggcaagccgggcttggccgcggtcaaggcggagctcgatatccagtga
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integrated database retrieval system
