Shinella oryzae: K6301_17420
Help
Entry
K6301_17420 CDS
T08112
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
soj
Shinella oryzae
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soj03400
]
K6301_17420
Enzymes [BR:
soj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
K6301_17420
DNA repair and recombination proteins [BR:
soj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
K6301_17420
Prokaryotic type
K6301_17420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UPA27340
LinkDB
All DBs
Position
pZ25:252774..254216
Genome browser
AA seq
480 aa
AA seq
DB search
MTNKTAAPVVVWFRKDLRLDDNAALAAAADTGRPVIPLYIREPEAAGTGPLGAAQAWWLH
HALASLARGLEKAGSPLVLRSGAAADVLRKFVSETGADTLYWNRRHDPAGISIDKEIKRV
FKAEGLDVHSFSGQLLHDPTRLLTGEKKPYRVYTPFWKALEREGEPPEPIEAPKHIKAPT
KAPPSEILDDWKFLPVKPDWAASFKDIWTPGEAAARERLDDFVDVAIADYKVDRDHPALD
ATSRMSPYLALGEISPARIWHATRGLKAPADDVIHFRKELAWREFCHHLHFHFPALAEKN
WNERFDDFPWEKAGKHFRLWTQGMTGYPIVDAGMRQLWKHGWMHNRVRMITASFLIKHLM
IDWRHGEKWFRDTLVDADAASNPANWQWVAGSGADASPFFRIFNPILQGEKFDPDGTYVR
AFVPELEHLDAAFIHKPFDAPADVLKKAKIELGTTYPKPIVDHAKARERALAAYKSLKNA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacaagaccgcagcgcccgtcgtcgtatggttccgcaaggaccttcgactggat
gacaacgccgcccttgccgcggcggccgacacgggacgacccgtgatccctctttatatc
cgcgaaccggaggccgccggcaccgggccgctgggcgccgcccaggcctggtggctgcat
cacgcgctcgcctcgcttgcgcgcggcctcgaaaaagccggctcgccgctcgtactgcgg
tccggcgcggccgccgatgttctgcgcaagtttgtctcggaaacgggcgcggatacgctt
tactggaaccgcaggcatgatccggccggcatttccatcgacaaggagataaagcgcgta
ttcaaggccgaaggcctcgacgtgcacagtttctccggtcaactgctgcacgatccgacc
cgcctcctgacgggcgagaagaagccctaccgggtctatacgccattctggaaggcgctc
gagcgtgagggcgaaccgccggaaccgatcgaggcaccgaagcacatcaaggccccgacg
aaggcgccgccgtccgaaatactcgacgattggaaattcctgcccgtcaaaccggactgg
gcggcatccttcaaggacatctggacgcccggcgaggcagccgcacgcgaacgcctggac
gacttcgtggacgtcgccattgcggactacaaggtggatcgagatcatcccgcgctcgac
gcgacgtccaggatgtcgccctacctggcgctcggtgaaatctcccctgcccgcatctgg
catgcgacgcgcggcctgaaggcgcccgccgacgacgtgatccacttccgcaaggagctg
gcctggcgcgagttctgccaccatctgcatttccattttcccgcccttgccgagaagaac
tggaacgagcgcttcgacgactttccctgggaaaaggcaggcaagcatttccgcctgtgg
acacagggcatgacgggctacccgatcgtcgatgccggtatgcgccagctctggaaacat
ggctggatgcacaaccgggttcgcatgatcacggcatcgttcctcatcaagcatctgatg
atcgactggcggcatggcgagaagtggtttcgcgatacgctggtggacgcagacgccgca
tcgaacccggccaactggcaatgggtggcgggctcgggtgccgacgcctcccccttcttc
cgcatcttcaatccgatcctgcagggtgagaaattcgaccccgacggcacctatgtccgc
gccttcgtgccggaactggagcatctcgacgcggcctttatccacaaaccgttcgatgcg
cccgctgacgtgctgaaaaaggcgaagatcgagttgggcacgacctatcccaagccgatc
gtcgaccacgccaaggcgcgcgaacgcgcactggcggcctacaaatccctgaagaacgcc
tga
DBGET
integrated database retrieval system
