Shinella oryzae: K6301_17660
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Entry
K6301_17660 CDS
T08112
Name
(GenBank) MurR/RpiR family transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
soj
Shinella oryzae
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
soj03000
]
K6301_17660
Transcription factors [BR:
soj03000
]
Prokaryotic type
Helix-turn-helix
Other families
K6301_17660
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SIS
HTH_6
SIS_2
DUF6299
DUF218
Trp_repressor
Xre-like-HTH
HTH_38
DUF7526
HTH_AsnC-type
DUF7343
MarR
Motif
Other DBs
NCBI-ProteinID:
UPA27383
LinkDB
All DBs
Position
pZ25:310417..311328
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AA seq
303 aa
AA seq
DB search
MNDARPLSDLKQSDLLERIQERYGTLRKSERIVADFLRENAGRRLDSSITELGRTLGVSE
ATISRVSRALGYDGYSDMKLSLAEGARARASFVNLPLEIEDTDSLISTSSKLANLLIAGL
DGTQRMLDAHRLEQAVEALRKARKIVFVGVGGAAAICDEAAHMFMKAGFEATSLRDGYTQ
TIVAATMTEKDVMVGISHTGTTETVTDALHLARERKATTIAITSNAGSEVARAADVALTT
WSAGQQLVPLHGDFLEGRLSQLFLIDLLYVGTIFRAGEEPAKALKVTGEALEKRYRHKNG
KAG
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgctcgccctttgagcgaccttaagcaaagcgaccttctggaacggattcag
gaacgctatggcacgctcaggaaatcggagcgcatcgtcgcggacttcctgcgggaaaat
gcgggacggcgtctcgattcctccatcacggaactcggccgcacgctcggcgtttcggaa
gccacgatcagccgcgtcagccgcgcgcttggctatgacggctattcggacatgaagctg
tcgcttgccgaaggtgcccgcgcccgtgcgagcttcgtcaacctgccgctcgagatcgaa
gataccgactccctgatcagcacatcgagcaagcttgccaatctcctgatcgccggcctc
gacggcacccagcgcatgctggacgcccaccggctggagcaggcggttgaggccctgcgc
aaagcgcgcaagatcgtcttcgtcggcgtgggcggtgcggccgcgatctgcgacgaggcc
gcccatatgttcatgaaagcgggcttcgaggccaccagcctgcgcgacggctacacccag
acgatcgttgccgcgacgatgaccgagaaggacgtgatggtcggcatctcgcataccggt
accaccgagacggtaacggacgcgttgcatctggcacgcgagcgaaaggcaacgacgatt
gccatcacgagcaatgccggctcggaggtcgcgcgcgccgccgacgtcgcactgacgacc
tggagtgcggggcagcagctcgttcccctgcacggcgactttctggaggggcggctcagc
cagctgttcctgatcgacttgctttatgtcggcacgatcttccgcgcgggcgaagagccg
gccaaggcgctgaaggtcacaggcgaagccctcgaaaagcgctatcggcacaaaaacgga
aaagccggctga
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