Shinella oryzae: K6301_17825
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Entry
K6301_17825 CDS
T08112
Name
(GenBank) DegQ family serine endoprotease
KO
K04771
serine protease Do [EC:
3.4.21.107
]
Organism
soj
Shinella oryzae
Pathway
soj01503
Cationic antimicrobial peptide (CAMP) resistance
soj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K6301_17825
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
K6301_17825
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
soj01002
]
K6301_17825
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
soj03110
]
K6301_17825
Enzymes [BR:
soj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.107 peptidase Do
K6301_17825
Peptidases and inhibitors [BR:
soj01002
]
Serine peptidases
Family S1: chymotrypsin family
K6301_17825
Chaperones and folding catalysts [BR:
soj03110
]
Other chaperones and cochaperones
DegP / HtrA
K6301_17825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin_2
PDZ_2
PDZ_6
PDZ
Trypsin
Tricorn_PDZ
Peptidase_S29
Motif
Other DBs
NCBI-ProteinID:
UPA27413
LinkDB
All DBs
Position
pZ25:350154..351653
Genome browser
AA seq
499 aa
AA seq
DB search
MIRILQRHRAAALLGVALLAVPIATSGLVGARNAEAAAPASINSPLADGSFASIVSTDKP
AVVTITTVLKAENASANGAMPFGGESPFDQQFRDFFGERQMPQPRSEKAQALGSGFVLTS
DGYIVTNNHVIDKASTIKVTLDDGTELPAKLIGADPKSDLAVVKIESDKPLATIGWGQSD
KLRAGDPILAIGNPFGIGTTVTAGIVSARGRDLHSGPYDDFIQIDAPINHGNSGGPLVGL
DGKVVGINTAIYSPNGGSVGVGFAIPSDQAQTVVAKLMKDGSIEHGFIGVQIQPVTSDIA
DAIGLSKPAGALVARVDDGTPAAAAGIHSGDVITALGGKPVASPRELSRMVADLTPGEKE
GLTVWRDGAAKDLSVVIGNNDDGGQVVADAGGKSGKAEQRVPTIGVQLGDLTADMRESLG
LPKDEKGAIVEGVNPDKPAADAGLQPGDVILSVNQKRVGSASEAKTAVADAGKAGRKTVL
LLVQRQDEQTFVTVPFAAG
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggatacttcaaagacatcgcgccgcagcgcttctcggtgtcgcattgctggcg
gtgccgatcgcgacctccggccttgtcggcgctcgaaacgcggaggcggcggcacctgcg
agcatcaactccccccttgcggatggatcgttcgcctccatcgtttcgaccgacaagccg
gctgtcgtcaccatcacgacggtcctgaaggccgagaacgcttcggccaacggcgccatg
ccgttcggcggggaatccccgttcgaccagcagttccgtgacttcttcggcgaacgccag
atgccgcaaccgcgcagcgaaaaagcccaggccctcggctccggtttcgtgctgaccagt
gacggctatatcgtcaccaacaaccacgtcatcgacaaggcgagcacgataaaggtgacg
ctggacgacgggacggagcttcccgccaagctgatcggcgccgatccgaagtcggacctc
gccgtggtgaaaatcgaaagcgacaagccgctggcgacgatcggctggggccagtccgat
aaattgcgggcgggtgacccgatcctcgccatcggcaatccgttcggcatcggcacgacg
gtcacggcgggtatcgtctcggcgcgcggccgcgaccttcacagcggaccatacgacgac
ttcatccagatcgatgcgccgatcaaccacggcaattccggcggcccgctggtcgggctc
gatggcaaggtggtcggcatcaacaccgcgatctattcgccgaacggcggcagcgtgggc
gtcggcttcgccattccgtccgaccaggcgcagaccgtcgtcgccaagctgatgaaggac
ggctccatcgagcacggcttcatcggcgtgcagatccagcccgtgacatcggacattgct
gacgccatcgggctttccaagccggccggcgcgctggtggcccgggtcgacgacggcacc
cctgcggcggcggccggcatacattccggcgacgtcatcaccgcgcttggcggcaagccc
gtcgcgtctccgcgcgagctctcccgcatggtggcggacctgacgcccggcgagaaggag
ggccttacggtctggcgcgacggcgccgccaaggacctttctgtcgtcatcggcaacaat
gacgatggcggacaggtcgtggccgacgcgggcggcaaatcgggcaaggcagaacagcgc
gtgccgaccatcggcgtgcagctcggcgacctgacggcggacatgcgcgaatccctcggc
ctgccgaaggacgagaagggcgccatcgtggagggcgtcaatccggacaagccggccgct
gacgcgggcctccagcccggcgatgtcatcctttcggtgaaccagaagcgggtcggttcg
gccagcgaagccaagaccgccgtcgccgacgccggcaaggcgggccgcaagaccgtgctg
cttctcgtgcagcgccaggacgagcagaccttcgtcaccgtccccttcgccgcaggctga
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