Shinella oryzae: K6301_17950
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Entry
K6301_17950 CDS
T08112
Name
(GenBank) ABC transporter permease
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
soj
Shinella oryzae
Pathway
soj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K6301_17950
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_17950
Transporters [BR:
soj02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
K6301_17950
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Ortholog
Paralog
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Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
UPA27435
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Position
pZ25:complement(379925..381103)
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AA seq
392 aa
AA seq
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MSGPSPRMGRSLLLLAPLFLFLIGFFVWPLFSMMSQAVSDPAVLRLLPRTADVVGEWDRQ
SPPSMPMQTALMDDLRAVDDDQALGDMVRRLNSARSGFRTLMSKTTSALSDTANPPPDLV
SIDKRWEKPEFWIAIADALSPLTDRNLLAAVDLGRNAAGAIEHLPADQSVNRVILVRTFW
IAALVTFFCACIGFPYAIIAASLSGWKRDLMLAAVLLPLWTSLLVRTAAWFILLQEQGLI
NDFLRAIGLIDAPLALIFNRTGVIIAMTHVLLPFMVLPIYSVLITIPKNLMPAAASLGAP
PMRAFLRVLLPLSLRGVASGGLLVFISAIGYYITPALIGGPGDQMISSIIAFYATGSANW
GMAGALGMVLLVATLLLYSVYARLSSDEPGRR
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgagcggaccgtcgccccgcatggggcgctccctgttgctgcttgcgccgctttttctc
ttcctcatcggcttcttcgtctggccgctgttcagcatgatgtcgcaggccgtgtccgac
cccgcggtcctgcgcctcttgccgcgcaccgcagacgtggtgggtgaatgggatcgccag
tctccgccgagcatgccgatgcagacggcgctgatggacgatctcagggctgtcgacgac
gatcaggcgctcggcgacatggtgcgccgcctcaacagcgcccgctccggctttcgcacc
ttgatgtcgaagacgacgagtgcgctttccgacaccgcaaatccgccgcccgatctggtt
tccatcgacaaacggtgggaaaagccggaattctggatcgcgattgccgatgcactgtcc
ccactcaccgaccgcaacctgctcgcggccgtcgatctcgggcgcaacgcggcgggcgct
atcgaacatctgccggccgaccagtccgtcaaccgtgtgatcctggtgcgcacgttctgg
attgcggcgcttgtcacgttcttctgtgcctgtatcggttttccctatgcgatcatcgcc
gcgtcgctgagcggctggaagcgtgacctgatgctggccgccgtcctgctgccgctctgg
acatcgcttctggtgcgcacggccgcatggttcatcctcttgcaggagcaggggctgatc
aacgatttcctgcgcgccatcggcctcatcgacgcgccgctggcgctcatcttcaaccgc
accggcgtcatcatcgccatgacgcatgtgctgctgcccttcatggtactgccgatctat
tcggtgctcatcaccatcccgaagaacctcatgccggcggctgcttcgctcggtgcgccc
ccgatgcgcgccttcctgcgcgttctgctgccgctcagcctgcgcggcgtcgcgtcgggg
gggctgctcgtcttcatctcggccatcggctattacatcacgccggcgctgatcggcggg
ccgggcgaccagatgatttcctcgatcatcgcgttctacgcgacgggttcggcaaactgg
ggcatggccggcgcactcggcatggtgctgctggtggcgacgctgttgctctacagcgtc
tatgcgcggctttcctcggacgagccggggaggcgctga
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