Shinella oryzae: K6301_18105
Help
Entry
K6301_18105 CDS
T08112
Name
(GenBank) DeoR/GlpR family DNA-binding transcription regulator
Organism
soj
Shinella oryzae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_24
MarR
HemN_C
MarR_2
HTH_IclR
GntR
Motif
Other DBs
NCBI-ProteinID:
UPA27464
LinkDB
All DBs
Position
pZ25:complement(415004..415858)
Genome browser
AA seq
284 aa
AA seq
DB search
MAGFPVNKKVDVKDLLSEELPSDSRHARQIARRQMIAEAVIAEGSLRIEDLTERFGISLM
TAHRDVDELVSRGLFRKTRGIVSAAPTSLIESSDAYRATKQAKEKKAIARAAMQFVEPGQ
AIFMDDATTVHEMTRFLPAKVPLTVITNSLVLITELKEVKDINLICLGGQFYHWCNAFMG
HITTNEIRRLRADTVFMSLSAIVDEAVYHQSPETVETKRAMFECASRRVLLADHTKFERR
ALHHFATLQEFDAVIVDEDIPVSHLSRLRSKGINVIVADGERSG
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggcaggatttcccgtgaacaagaaagtcgatgtcaaggatttgctttcggaggagttg
ccgagcgacagccggcatgcccgacagatcgcgcgacgccagatgatcgccgaggcggtg
atcgccgagggctcgctgcgcatcgaggacctgaccgaacgtttcggcatcagcctgatg
accgcccatcgcgatgtcgacgaacttgtcagccgtgggctgtttcgcaagacgcgcggc
atcgtttccgcagcgccgacgagcctgatcgagtcctccgacgcctatcgggcgaccaag
caggccaaggagaagaaggccatcgccagggcggcgatgcagttcgtcgagccggggcag
gcgatcttcatggacgatgccaccacggtccacgagatgacgcgtttcctgccggccaag
gtgccgctgacggtcatcaccaattccctcgtcctcatcaccgagctgaaggaggtgaag
gacatcaacctcatctgtctcggggggcagttctaccattggtgcaatgccttcatgggg
cacatcaccaccaacgagatccgccggctgcgcgccgataccgtgttcatgtcgctctcg
gccatcgtcgacgaggccgtctaccaccagtcgccggagacggtggagaccaagcgggcg
atgttcgaatgcgcgtcgcgtcgcgtgctcctggctgatcacaccaagttcgagcggcgc
gcgctgcatcacttcgcgacgctgcaggaattcgacgccgtgatcgtcgacgaggatatt
ccggtctcccatctgtcgcgcctgcgctcgaaggggatcaacgtcatagtggcggacggg
gagcggtccggctga
DBGET
integrated database retrieval system
