Shinella oryzae: K6301_18240
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Entry
K6301_18240 CDS
T08112
Name
(GenBank) hypothetical protein
Organism
soj
Shinella oryzae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALTTAQ_rpt
Motif
Other DBs
NCBI-ProteinID:
UPA27491
LinkDB
All DBs
Position
pZ25:444508..451296
Genome browser
AA seq
2262 aa
AA seq
DB search
MTSVVSSLTINQIRQLKPEVIREWTTEDVASLSTGQLGALSSAQVAALEAEDIGVLGARI
SAISRGAILGLSLEHIGVLEKFAIESLTTGQVGALSTAQLGALTSDQAEALTPGQINMLS
AAQLAALGPEEVATFSEEDMAAISYKSVQGLSPAAIAALSTDQIASLAPLSLAGLTSAQA
AALTAEQSEALSIEQVALLKPAQIAALGPDAIQAFSAEQIAALNTGAIGGLTTAQIKLLD
TDRIEAFTPAQVRALTAQQLAAIGPDGIVTFSPADMAAISAKSIAGLSPDMIAALDGEQI
AALDPKTIAGMTAAQAAALTPDQIGEFTPAQARALTATHLGAFSAESLAALSSESIAALS
NQAIKGISTTAIAGLDGEVATLVESLSASQISALDAKQITALGAQGLRWFTPAQITAISP
AGVKGLTTDQIAELDSDQAAAFTPGQIKLFAANQIGAFDRFSIAAFSLEDIAAIAGNAIG
GLSTDAIEGLTPAQIAALSPKAIAGLTAQQIAALLPEQAAALTPAQVKAMTPTQVGALSP
EAIAAFSPAKIAAIPTNAIGSLSTETLAALDSAQIAAMTGAQIGALKPAQVAVLDVEVLS
PAQVRFMTAQQLAALSAEALSTFSAEDMAAITNKAITGISSAAIAGLPAGHIAALSTATL
ASLTTAQMRGVTSEQLLALSTGQIAGLNAGQISAISSSALLELSPAQFGAINGKAVAGLS
TSALAALSTDQIASLSSGVIAGLTTQQIAALSPGQLEALTPTQVRALSAKQLTALGSAGI
ATFSTDDIAAINAKAIPGLSSSAFAELTSSQLAALTTAQIAALLPAQISAASEGFFAGLT
PAQVAVLGTGIIASLKPEQIEAMTTAQVEALTPTQIRVLNSAQLAALGPEELATFSTADI
AAISNKAISGLTAGALAGLTTQQTVALSRSALSGLTAEQVEALSTAQIGALTTTQIGGLT
SAQIAALELQDLQALTPAQITAIGGSALKGLGTDLLAGLSSAQLAALTTSAVASLTSVQV
EALTSQQIGLLSSSQVKALTSAQLGALGSNVSALTPAQIASLSAAAIAGLATDQISALQS
GQLAALTPAQIGSLSSSQVAALGSDNLANLTTAQIAAISAGGISGLTSAQINALGAGQIA
ALTAKQMAGLTSTQIPAFSTAKIAALTTAQIAGLNAGSISGFTTQQLAVLNTAQAEALTS
AQVGTLSSEQIAQFGTDSIAAFSTKDISMITAGAIAGLTTATLASLSTAQIAALSPAAVG
ALSTRQIDALSSAQVQALSRTQIAAMSSAQIAALGPDDIATFSVQEMGAISAGAMAGLST
DALGALSTAQIAGLSTAGISGMTTRQISALSLAQAEALSTTQIGSLSSTQLAAFTTDKIA
TFTTREIAAIGATAVGGLSSDTIASLSTAHIAALSTAAISGLQPRQIAALTSAQLDALRP
DQVRILDARQIASLGPEYIASLTPAQIAALGTAAIAGLSTEQVAALSTAQAEALAPAQIA
AFTSRQIAALSAEQLDTFSLADMAAISSTAMAGLSTGMLASLSTGQIAALGPAGLSGMTS
AQIGALSLAQLEALTTAQIGALGSRQIAALTPQNLAGFSSAQIAALSAGAIPGLTAAQIA
GLSSAQAEALTSAQIAALGSAQISAFSPENIGTFTTAEIASIGSWAVAGLPTAVIAALPA
GHIAALNAAGLTAAQVSSLSASQFEALTNLQLAALGSTQIAAFGTAGIAALSPAQIAALS
TAAVAALSTAQIGALSTGQAEALTPTQVGALTSQQIAAFSADDLSLFSTADIAALGSRAV
LGLSTATLATLTTAQIAALSTAGISGLSSAQINALTEEQIEALTATQIGALSSKQVAVLD
AADIALFTTAEIAAIGSAAIAGLAVAIIAGFSPEQISAISPAGIGGLSTSQIAALGSTQI
TGLSTQQIASLGSKQIAALGAADIAALTPGQLAAISPAGLAGLTGPQAAGLSFEQAEALS
ASQIAALGSAALGGLSSAALDTLSTDKLAAIGSAAIKGLPSSYLATLETAEIAALSTGAI
SGLSSAQVAALSTQQVEALSAAQIAALSSPGTAGLTPAHMETISTEELASMSSSAIRGLT
TAVIGALSTESVAALRKEQIAALTYGQMGAMSTSQVSTLSTEQAGALTATQTAALGPAAL
AAFPIDNIVALGTNAISGLSTAALAGLTPEQANAFTPGQLAAMSQSQIDALPRGPGASPS
SFRTAAEDTGAPQDMQPQPETAVETGGQQNDIAAFISSYLEV
NT seq
6789 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcggtcgtttcatcgctcaccatcaaccagatccggcagctgaagccggaggtg
atccgggagtggacgacggaagacgtggcctcgctttcgactggccagctgggtgcgctt
tcctccgcgcaagtcgccgcgctggaagcggaagacatcggcgtgctgggcgcgcgcatc
agcgcgatctcgcgcggcgccattctcggcctgtcgctggaacatatcggcgtcctcgag
aaattcgcgatcgaaagcctgaccaccggacaagtgggcgcgctgtcgacagcccagctc
ggtgccttgacgagcgatcaggccgaggccctgacgcccggccagatcaatatgctgagc
gccgcgcagctcgccgcgctcggtcccgaggaagtcgcgaccttctccgaggaggacatg
gcggcgatcagctacaagtcggttcaggggctcagccccgcggcaatcgccgcgctctcc
accgaccagatcgcatcgcttgcgccgctttcgctggcagggctcacatccgcgcaggcc
gcggcgctcactgcggagcagagcgaggcgctttccatcgagcaggtcgcccttctgaag
cccgcccagatcgcagcactcggcccggacgctatccaggcattctccgccgaacagatc
gccgcgctcaacaccggcgcgatcggcggcctgacgaccgcacagatcaagcttctggac
accgaccggatcgaggccttcacgccggcgcaggtgcgggcgctcacggcccagcagctc
gccgccatcggcccggacggcatcgtcaccttctctcccgccgatatggccgcgatctcg
gccaaatcgattgccggcttgagcccggacatgatcgccgcgctggatggcgagcagatc
gcggccctcgacccgaaaaccattgcaggcatgacggccgcccaggccgcggcactcaca
cccgatcagatcggcgagttcacgcccgcgcaggcccgcgccctgaccgcaacccacctc
ggcgccttctcggccgaaagccttgcggcactgtcgagcgaaagcatcgccgccctgtcg
aaccaggcgatcaagggtatcagcacgaccgcaatcgcagggctggacggcgaagtcgcg
acgctcgtggaatcgctgagcgcaagccagatcagtgcgctcgacgcaaaacagatcacg
gccctcggcgcgcaaggcctgcgctggttcacgcccgcccagataaccgccataagcccg
gcaggcgtcaagggactgacgacggatcagatcgccgagctcgatagcgaccaggccgcg
gcctttacgcccggccagatcaagctcttcgcggcgaaccagatcggcgcgttcgaccgc
ttctccatcgccgccttctcgctggaggatatcgcggccatcgccggcaacgccatcggc
ggtctcagcacggatgccatcgaaggcctgacgccggcgcagatcgccgccctcagcccg
aaggccatcgccggcctgaccgcacagcagatcgcggcccttttgccggaacaggcagcg
gctctcacgcccgcccaggtgaaggcgatgacgccgacccaggttggcgcactttcgccc
gaagccattgccgccttctctcccgccaagatcgcggccattccgaccaatgccatcgga
agcctgagcacggagacgctcgcagctctcgacagcgcccagatcgcggccatgacgggc
gcgcagatcggcgcgctgaagcctgcccaggtcgccgtgctcgatgtcgaggttctttcg
ccagcccaggtccgcttcatgaccgcgcagcagctcgcggcgctcagtgccgaagcgctg
tcgaccttctctgccgaagacatggccgccatcaccaacaaggcgatcaccggcatcagc
agcgccgcgatcgccggtctgccggccggccacatcgccgcgctcagcacggcgaccctc
gccagcctgaccacggcgcagatgcgcggcgtcacgagcgaacagctgctggcgctctca
accggacagattgccggcctcaatgcagggcagatctccgcgatttcgtccagtgcgctg
ctcgaactttcgccggcccagttcggcgccatcaacggcaaggcggtggctggtctgtcc
acgtcagcgctcgcggccctgtcgacggaccagatcgcctcgctcagctcgggtgtcatt
gccgggttgaccacgcaacagatcgcggccctcagcccgggccagctcgaggcgctcacg
ccgacccaggttcgtgcgctcagtgccaaacagctgaccgcactcggttcggccggcatc
gcaaccttctcgaccgacgacatcgcggcgatcaacgcgaaggcgatacctggactgtcc
agctctgccttcgccgaactgacatccagccaactcgccgccctcaccaccgcacagatc
gccgccctgcttcccgcgcagatcagcgccgccagcgaaggcttctttgccgggctgaca
cccgcgcaggtcgccgtcctcggcacgggcatcatcgccagcctcaagcccgagcagatc
gaggccatgacgaccgcgcaggtcgaggcgctcacgccgacccagatccgcgtcctgaac
tccgcccaactcgccgcgctcgggcccgaggaactcgcaacgttctcgaccgccgatatc
gcggcaatcagcaacaaggccatctcaggcctgacggccggcgcgctggccggcctcacc
acccagcagacggtggctctcagccgctcggcgctttcaggcctcaccgccgagcaggtc
gaagccctgtcgacggcccagatcggcgcgctcacaacgacgcagatcggcgggctcacc
tccgcacagatcgcagcactcgaactccaggatctccaggctctgacgcccgcgcagata
acggcgatcggcggcagcgctctcaaggggctcggcacggatctcctggcgggcctgtct
tcggcccagctcgccgcgctcaccaccagcgccgtcgcgagcctcaccagcgtccaggtg
gaggccctgacatcccagcagatcggcctgctgtcctccagtcaggtcaaggcgctgacc
tccgcacagctgggcgcgctcggcagcaatgtatcggccctcacccccgcccagatcgcc
agcctcagcgccgccgccatcgcgggtctcgcgaccgaccagatttccgccctgcaatcg
ggccagttggccgcgctgacgccagcccagatcggttcgctgtcttcgagccaggtcgcg
gcactgggcagcgacaacctggccaacctgacgacggcgcagatcgccgccatcagcgcg
ggcggcatttccggcctgacgtcggcccagatcaatgcgctcggcgccgggcagatcgca
gcgctcaccgccaagcagatggcgggcctgacctcgacgcagatcccggccttcagcacc
gccaagatcgcagcgctaaccacggcgcagattgccggtctcaatgccggcagcatctcc
ggtttcacgacccagcagctcgccgtgctgaacaccgcccaggcggaggccctgacgagc
gcgcaggtgggaacgctgagctccgaacagatcgcgcagttcggcaccgacagcatcgcc
gccttctccacgaaggacatctcgatgatcacggcgggcgccatcgccggcctaaccacc
gcaacccttgcctcgctttcgacggcacagatcgccgcgctcagccccgcagccgtcggc
gcgctcagcacacgccagatcgacgccctgagcagcgcgcaggtacaggcactgagccgc
acgcagattgccgcgatgagctcggcgcagatcgccgcgctcggccctgacgacatcgcc
accttctccgtccaggaaatgggcgcgatcagcgcgggcgcgatggccggcctttcgacg
gacgcgctcggcgcgctttcgacggcgcagatcgcaggcctcagcacggccggcatcagc
ggcatgacgacgaggcagatttccgcgctgagcctggcgcaggcggaggcgctttccacc
acccagatcggcagcctgtcctccacgcagcttgccgccttcacgacggacaagatcgcc
accttcacgacgcgcgagatcgctgcgatcggcgcaacggccgtcggcggcctttcaagc
gacaccatcgcctcgctttcgacggcccatatcgcggcgctgagcacggcggcgatcagc
gggctgcagccgcgccagatcgcggccttgaccagcgcgcagctcgacgcgctgcggccg
gaccaggtgcgcatcctcgatgcgcgccagatcgcctcgctcgggccggagtatatcgcg
tcgctgacgcccgcgcagattgccgcccttggcactgctgccattgcgggcctttcgacc
gaacaggtcgccgcactttcgacggcccaggccgaagcgttggcgccggcgcagatcgca
gccttcacctcccgccagatcgcggcgctgagtgccgaacagctcgacaccttctcgctg
gccgacatggcggccattagttccaccgccatggccggcctgtcgacgggcatgctggcg
tcgctctcgacgggccagatcgcagcccttggccccgccgggctttcgggaatgaccagc
gcgcagatcggagccctcagcctcgcgcagctcgaagccctgacaacggcgcagatcggt
gctctcggctcccggcagatcgcggcactgacgccgcagaacctcgcgggcttctcatct
gcgcagatcgccgcgctcagcgccggcgcgatccccggcctcaccgcggcgcagatcgcc
ggcctctccagcgcgcaggccgaggcgctcaccagcgcgcagatcgcggcgctcggatct
gcccagatctccgccttcagccccgaaaatatcggcaccttcacgacggccgagatcgct
tctatcggctcatgggctgtcgccgggttgccgacggccgttatcgcggcccttccggca
ggccatatcgccgccctcaacgcggcaggccttactgccgcgcaggtgtcttcgctcagc
gccagccagttcgaagcgctgacaaatcttcagctcgccgcgctcggctccacgcagatt
gcggccttcggcacggcgggcattgccgcgctttcgcctgcacagatcgccgctctcagc
acggccgccgtcgccgccctcagcaccgcacagatcggcgcgctctcgaccgggcaggcc
gaggcgctgacgccgacacaggtcggtgcgctgacctcacagcagatcgcggccttcagt
gctgacgatctctcgcttttctcgacggccgatatcgccgcgctcggctcgcgggccgtc
ctcggcctgtcgaccgccacgctggcgacgctgaccacagcccagatcgccgctctcagc
acggccggcatctccggtctgtcgagcgcgcagatcaacgccctcaccgaggagcagatc
gaggccctgaccgccacacagatcggtgcgctctcctccaagcaggtcgccgtcctcgat
gccgccgacatcgccttgttcaccacggcggaaatcgccgccatcggctcggcggccatt
gcgggcctggcggtggccatcatcgccggtttctcgcccgaacagatttcggcgatcagc
cccgccggcatcggtggcctgtccacaagccagatcgccgcgctcggctcgacgcagatc
accgggctctccacccagcagatcgcgtccctcggctccaagcagatcgcagccctcggc
gcggccgatatcgcggcacttacccccggccagcttgccgccatcagccctgccggtctt
gccgggctcactggcccgcaggccgcaggcctgagcttcgaacaggccgaagccctgtcc
gccagccagattgcggcgctcggttccgccgcactcggcggcctgtcgagtgcggccctc
gatacgctttcgacggacaagctcgccgccatcggatcggcggccatcaagggcctgccg
tcctcatacctggcgacgctggagaccgccgaaatcgccgcattgagcacaggcgccatt
tccggcctcagcagcgcgcaggtcgccgcgctctcgacgcaacaggtcgaggccttgtcg
gcagcgcagatcgcagccctcagctcgcccggcacggccggcctgacgcccgcgcatatg
gaaaccatctccacggaggagctggcgtcgatgagttcgtcggcgataaggggcctgacg
accgccgtcatcggcgcgctgtcgaccgaaagcgtggcagccttgcgcaaggagcagatc
gccgccctcacctacggccagatgggcgccatgagcaccagccaggtctcgaccctctcg
acggagcaggccggcgcgctgaccgccacgcagacggcagcacttggcccggcagccctc
gcggccttccccatcgacaacatcgtcgcgctggggaccaacgccatctcgggtctgagc
acggcggcgcttgccgggctgacgccggagcaggcgaatgccttcacccccggccagctc
gccgcaatgagccagtcgcagatcgacgcgctgccgcgcgggccgggcgcctcgccctct
agcttccgcaccgctgcggaagacaccggcgcgccgcaggatatgcagccccagcccgag
accgcggttgaaacgggcggccagcagaatgatatcgcggccttcatctcttcctatctg
gaagtctga
DBGET
integrated database retrieval system
