Shinella oryzae: K6301_18340
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Entry
K6301_18340 CDS
T08112
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
soj
Shinella oryzae
Pathway
soj02010
ABC transporters
soj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K6301_18340
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K6301_18340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_18340
Transporters [BR:
soj02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
K6301_18340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Motif
Other DBs
NCBI-ProteinID:
UPA27509
LinkDB
All DBs
Position
pZ25:473612..474910
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AA seq
432 aa
AA seq
DB search
MMNRRAMLQGALGAGAAGGMLLADMNRSAKAQDTSPIAVGSALPMSGIAAADGIEFKNGL
DLAAEEINAAGGILGRPVEIHIEDTKEMGADLVSQSMQRLIDRFNTPVLINGYNLGTNMI
EMDVAADNDVIMMHYNTLISHNEKFKTDPERYYGSFQGDPPEFWYGPGCLNFLKSLSDAG
TWKAPNKKIAIIPSANEYSIVIANAIRDQAKDYGFEVSLFETVPFPTNQWGPTLAKLRQD
PPAAIIVTHFLPQDLAQFMVQFLTQPTNSLVYMQYGPSLPAFREIGGETINGVIYSTVVG
CLPDDFSKPFRESYRAKFGPNSAYITGSQTYDGLWMWAIAAAIAGGPGEPFNKEQVSKVA
AVMRRNVYRGVNGTYRADPAGQSAYCYPTQTADPSLGMPHQFLQHQDYKTDPKLIAPALY
ATDTFLLPPWIK
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatagacgtgcaatgcttcagggcgccttgggagccggcgccgccggtggaatg
cttctcgccgacatgaacaggtccgccaaggcgcaggatacctcgccgatcgcggtgggc
tcggcgttgccgatgtccggcatcgcggcggccgatggcatcgagttcaagaatggcctc
gacctcgccgccgaggagatcaatgccgccggcggcattctggggcggcctgtcgagatc
cacattgaggacaccaaggaaatgggggcggacctcgtgtcccagtccatgcagcggctg
atcgaccgcttcaacaccccggtgctcatcaatggctataatctcggcaccaacatgatc
gagatggacgtcgcggccgacaacgacgtcatcatgatgcactacaacacgctcatctcg
cacaatgagaagttcaagaccgatcccgaacggtattatggttcgttccagggcgatccg
ccggaattctggtacgggcctggctgcctgaacttcctgaagtcgctttcggacgccggc
acgtggaaagcgccgaacaagaagatcgccatcattccctcggcaaacgagtattcgatc
gtcatcgccaacgcgatccgcgatcaggccaaggattacggtttcgaggtgagcctgttc
gagaccgtgccgttcccgacgaaccagtggggcccgacactggcaaagctgcgtcaggac
ccgccggctgccattatcgtcacgcacttcctgcctcaggaccttgcccagttcatggtg
cagttcctcacgcagccaaccaacagcctcgtctacatgcagtacggcccctcccttccc
gctttccgcgagatcggcggcgagacgatcaacggcgtcatctattcgacggtcgtcggc
tgcctgccggatgacttctcgaaaccgttccgcgagtcctatcgcgcgaaattcggcccc
aactccgcctacatcacggggtcgcagacctatgacgggctgtggatgtgggcgatagcc
gctgccatcgccggggggccgggcgagcccttcaacaaggagcaggtgagcaaggtcgcc
gccgtcatgcgacgcaacgtctatcgcggcgtcaacggaacctaccgggccgatcccgcc
ggccagtccgcctattgctacccgacacagaccgccgatccttcgctgggcatgccgcac
cagttcctgcagcatcaggactacaagaccgatccgaagctcatcgcaccggcgctctac
gccaccgacacgttcctcctgccgccctggatcaaatag
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