Shinella oryzae: K6301_18405
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Entry
K6301_18405 CDS
T08112
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
soj
Shinella oryzae
Pathway
soj02010
ABC transporters
soj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K6301_18405
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K6301_18405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_18405
Transporters [BR:
soj02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
K6301_18405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Dr_adhesin
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
UPA27522
LinkDB
All DBs
Position
pZ25:complement(488777..490126)
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AA seq
449 aa
AA seq
DB search
MFKTFLRGAIVAAASVLVLAGSAQAIDTTSGPDSDKQFFPIASYRVGPYAASGASIWAGR
IDYYRYINEVEGGINGVPIVWQECETEWTAEKGIECYERFKRGLNGAPVSAYFPNGAPAA
YALSDRAAQDKIPLVTLAYGRTEATDGRVFPYIFPVMVTFYSEASAVVNYIAEKEGGFDK
LKGKKIATVYHDSAYGRETLDPLALLAEKYGFENIQIPVPDPGSEQSSQWRQVREQKPDW
VFLRTWGVSTPVAIKTAQRFGFPADRIIGDVWASSEEDVIPAGNAAKGYLALTPYPAGAD
FEIHKRLKQHIIDTGKSDLRDTKAFGSVYYNSGLVDALISVEIVRQAQAKFGNRPITGEE
GQCALEHLKLDDAALDKAGFLGLVQNLQLTPADHEGGGAVRVQQWTGENWNLVSDWVQAD
REALRPLIDAKSAAYAKEHGITPRDVGTN
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagactttcttgcgcggcgcgatcgtcgcagccgcttccgtgctggtgcttgcg
ggctccgcacaggcaatcgacacgacgtcgggaccggacagcgacaagcagttcttcccg
atcgccagctatcgcgtcggtccctatgcggcctccggcgcgtcgatctgggcgggtcgc
atcgactactaccgctacatcaatgaagtggagggcggcatcaacggcgtgccgatcgtc
tggcaggaatgcgagacggaatggacggccgaaaagggcatcgaatgctacgaacgcttc
aagcgcggcctgaacggcgcgccggtctctgcctatttccccaacggcgcaccggccgcc
tatgcgttgtccgaccgtgcggcgcaggacaagattccgctggtgacgctggcctatggc
cgcaccgaagcgaccgacgggcgcgtctttccctacatcttcccggtcatggtgacgttc
tacagcgaggcctcggccgtcgtgaactacatcgccgagaaggaaggcggctttgacaag
ctcaagggcaagaagatcgccaccgtctaccatgatagcgcctatggccgagaaacgctc
gatccgctggcgctgcttgccgagaagtacggtttcgagaacatccagattccggtgccg
gatccgggcagcgagcagtcctcgcagtggcgccaggtccgcgagcagaagccggactgg
gttttcctgcgcacctggggcgtttccacgccggtcgccatcaagacggcgcagcgcttc
ggcttcccggccgaccgcatcatcggtgatgtctgggcatcttcggaagaggacgtcatt
cccgccggcaacgccgcaaagggctatctcgcgctgacaccctatccggccggcgccgat
ttcgagatccacaagcgcctcaagcagcacatcatcgataccggcaagtcggatctgcgc
gacaccaaggcgttcggcagcgtctactacaattccggcctcgtcgatgcgctcatatcg
gtcgaaatcgtccggcaggcgcaggcgaaattcggcaacaggccgatcacgggtgaggaa
ggtcagtgcgcgttggaacacctcaagcttgacgatgccgcactcgataaggccggtttc
ctcggtctcgtccagaacctccagctgacgcctgccgaccacgagggtggcggcgccgtg
cgtgtccagcagtggaccggcgagaactggaaccttgtcagcgactgggttcaggccgac
cgcgaggcattgcgcccgctgatcgacgccaagtccgccgcctatgccaaggagcacggc
atcacgccgcgcgacgtcggcaccaactga
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