Shinella oryzae: K6301_18495
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Entry
K6301_18495 CDS
T08112
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
soj
Shinella oryzae
Pathway
soj00521
Streptomycin biosynthesis
soj00523
Polyketide sugar unit biosynthesis
soj00541
Biosynthesis of various nucleotide sugars
soj01100
Metabolic pathways
soj01110
Biosynthesis of secondary metabolites
soj01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
K6301_18495 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
K6301_18495 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
K6301_18495 (rfbC)
Enzymes [BR:
soj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
K6301_18495 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UPA27539
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Position
pZ25:510871..511416
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AA seq
181 aa
AA seq
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MLFTRTDLEGVWLIEASPIRDERGSFVRTFCIDEMDLRGLEHHFVQHSLSRSTAKHTLRG
LHFQHAPHAEVKVVSCLNGAIWDVAVDLRPQSPTYRRWTAAELSADNMRQLYIPKGCAHG
FLSLTEDAVVGYLISTRYDPSAAAGLRYDDPALAIDWPAAPAVMSEKDRSWPLLADSVHH
A
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgctgttcaccagaaccgacctggaaggcgtatggctgatcgaagcgtcgccgatccgt
gacgagcgaggctcgttcgtcaggaccttctgcatcgacgagatggatctccgcgggctc
gaacaccacttcgtccagcacagcctttcgcgctcgacggccaagcacacgctgcgtggc
ttgcatttccagcacgcgccgcatgcggaggtaaaggtggtgtcctgcctgaacggcgcg
atctgggacgtcgccgtcgaccttcgcccacaatcgccgacctatcgccgctggacggca
gcggaactcagcgccgacaacatgcgccagctctatattcccaagggatgcgcccacggt
ttcctgtcgctgacggaggatgcggtggtcggctatctcatatcgacgcgctacgatccg
tccgccgccgccggcctgcgctatgatgatcccgcccttgcgatcgactggccggcagca
ccggccgtgatgtcggaaaaggacaggagctggccgctgcttgcggacagcgtacatcac
gcctga
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