Shinella oryzae: K6301_18710
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Entry
K6301_18710 CDS
T08112
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
soj
Shinella oryzae
Pathway
soj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K6301_18710
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_18710
Transporters [BR:
soj02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
K6301_18710
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UPA27577
LinkDB
All DBs
Position
pZ25:554789..555769
Genome browser
AA seq
326 aa
AA seq
DB search
MSETILSVENLRVEFETRRGTLVALDDISFSIAKGEVLGVVGESGAGKSMTGAAIMHLIP
RPGRIASGRILLGDQRIDNLDRTGIEAIRGRRIGMIFQDPLTSLNPLMTVGDHLTETIRV
HLPLNRRQARARAIELLEEVGIPDPTVRIDSYPHEFSGGQRQRVVIALALCAEPELVIAD
EPTTALDVSVQAQIIKLIRKLCSTRGTAFMLITHDMGMIAETADRVAVMYAGKVAEIGKV
SQVVGAPLHPYAQGLMGAIPSLDNEEPRLRQIPGSMPSLTALPGGCSFHPRCERAMDICR
QRAPALLGAMDHKVACHLYEREEVAA
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagacgattctttcggtcgaaaacctgcgtgtcgaattcgagacgcgccgcgga
acgctcgtcgccctcgacgacatcagcttctccatcgcgaagggcgaggttctcggcgtc
gtcggtgagtccggtgcgggcaaatcgatgacgggtgctgcgatcatgcatctcataccg
cgcccgggccgcatcgcgagcggccgcattctgctgggcgaccagcggatcgacaacctg
gaccgaacgggcatcgaagccattcgcggccggcgcatcggcatgatctttcaggacccg
ctgaccagcctcaatccgctgatgaccgtcggcgatcacctgaccgagacgatccgggtg
catctgccgctcaaccggcgtcaggcacgcgcccgcgcgatcgaactgctcgaggaagtg
ggcattcccgacccgacggtgcgcatcgattcctacccgcacgagttttccggcgggcag
cggcaacgggtggtcatcgcgctggcgctttgcgccgagccggaactggtcatcgccgac
gagccgacgacggcgctcgacgtttcggttcaggcgcagatcatcaagctgatccgcaag
ctgtgctccacgcgcggcacggccttcatgctcatcacgcacgacatgggcatgatcgcg
gagacggccgatcgcgtggccgtcatgtatgcgggcaaggttgcggagatcggaaaggtc
agccaggtcgtcggcgcgccgctccatccctatgcacagggcctgatgggcgccattccc
tcgctcgacaacgaggagccgcggcttcgccagattcccggctccatgccatcactgacg
gcgctgccgggcggctgctcgttccatccgcgttgcgagcgcgccatggatatctgccgc
cagcgcgcacccgcccttcttggcgccatggaccacaaggtcgcctgccatctttacgag
cgcgaagaggtggctgcatga
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