Shinella oryzae: K6301_18950
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Entry
K6301_18950 CDS
T08112
Name
(GenBank) sensor histidine kinase KdpD
KO
K07646
two-component system, OmpR family, sensor histidine kinase KdpD [EC:
2.7.13.3
]
Organism
soj
Shinella oryzae
Pathway
soj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K6301_18950
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
soj01001
]
K6301_18950
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
soj02022
]
K6301_18950
Enzymes [BR:
soj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
K6301_18950
Protein kinases [BR:
soj01001
]
Histidine kinases
OmpR family
K6301_18950
Two-component system [BR:
soj02022
]
OmpR family
KdpD-KdpE (potassium transport)
K6301_18950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KdpD
HATPase_c
DUF4118
HisKA
Usp
HATPase_c_2
Epimerase
HATPase_c_3
AAA_16
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UPA27622
LinkDB
All DBs
Position
pZ25:604891..607578
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AA seq
895 aa
AA seq
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MADDDRRDARRPDPDALLALAEKDRRGKLTVFLGAAPGVGKTYAMLSRAKRLKADGVDVV
VGLVETHGRSETAALLDGLEVLPRRRIAYRGRMLDEFDLDAALARRPRIVIVDELAHSNP
DDSRHPKRYQDIEELITAGIDVWTALNIQHLESLADVVAQITGVSVRERVPDIVLKRADE
VLLVDLAPSELIERLRDGKVYLPESANRAVDRFFRLGNLTALRELALRRTADRVDDQMVD
YLKQNAIDGPWATAERLLVCVGSDPLSEKVVRVASRLASGLNAPWLVVSIERADREADTP
GHVQRIETLFRLAEQLGAETRRVIGNDFVDEILKLARREHVTQIVIGTPKRAGWRKHVKQ
ALPEALANDAAGLGIHIVTPDGPSGERMRRPLALPRMQAWRQSALSAAGFVALTVLLGKT
IDIFVDLPNISLLFLLSVLGASVTGGYVAAFLAAVLSALAYNFFFIDPQRTFTIAAPHEV
FALFVFLIVAMIAGGFASRIRQQAEVAGLRATELQSLHDFSRKLATTEKSEDAIWLAVSQ
LQSRLRRNVVFLLARKGDLGVAAAWPPDTDLDVTDLTAARWTNDKREPAGRGTGTLPNSR
FEFRPLLGPHGIVGVCGVEHADEPLDLNAERMLSAVLDQTAIALDRARLADETIVQAARL
EGERYRDALLSSISHDLRTPLATITGAVTALRELGERMSAESRSDLLQSIEEESGRMSRF
VANLLDMTRIEAGTLKPKRDWIDVTDVVQSAVERTRKHAPGQIIETSIATDLPLIRGDSV
LISQVLFNLLDNAIKYGAGEPVNVYARREGKDVIISVTDLGKGIPPEDLDRIFEKFYRRG
NPDGRAPGTGLGLSIARGFIEAMGGKIHAESPALRKRGTRIVMRFPGSAEARGNA
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgacgaccgcagggacgcgcgacgtcccgacccggatgccctgcttgccctg
gcggagaaagaccgtcggggcaagctcaccgttttcctcggcgcagcacccggggtcggc
aagacctatgccatgctgtctcgggcaaagcgcctgaaggccgatggcgtcgatgtcgtc
gtcgggcttgtcgaaacccatggacggagtgaaacggcagcactgctcgacgggcttgag
gtcctgccccggcgccggattgcctatcgcggacggatgctcgacgagttcgatctcgac
gcggccctggcaaggcggccgcggatcgtcatcgtcgatgagctcgcccattccaacccc
gacgacagccgccatcccaagcggtaccaggatatcgaggaactcatcacggccggcatc
gatgtctggacggccttgaacatccagcatctcgagagcctggcggatgtcgtcgcgcag
atcaccggcgtgtcagtacgcgagcgcgtgccggatatcgtgctgaagcgggccgacgag
gtgctgctggtcgatcttgcaccgtccgaactgatcgagcggctgcgggacggcaaggtc
tatctgccggaaagcgcgaaccgtgcggtcgaccgcttcttccgcctcggcaacctgacg
gcgctgcgggaactggctcttcgccgcaccgccgaccgtgtcgatgaccagatggtcgac
tatctaaagcagaacgcgatcgacggcccctgggccacggccgagcggctgctggtctgc
gtgggctccgacccgctgtcggaaaaggtcgtgcgagtggcaagtcgcctcgcctccggg
ctcaacgcgccctggctcgtcgtatcgatcgagcgggccgaccgggaggcggacacgccg
gggcacgtacagcggatcgagacgctcttccggttggccgagcaactcggcgcggagacg
cgccgcgtgatcggcaacgacttcgtcgatgagatcctgaagcttgcgcgtcgggaacat
gtcacccagatcgtgatcggcacaccgaaacgcgccggctggcggaagcatgtcaaacag
gcgctcccagaggcgctggcgaacgatgcggccggcctcggcattcacatcgtgacgccg
gacggcccttcgggcgagcgcatgcggcgtccgctcgcgctccccaggatgcaggcgtgg
cgacaatcggcactgagcgccgcaggtttcgtcgcgctgaccgtgctgctgggcaagacg
atcgatatcttcgtcgatctgcccaatatctcgctgctcttcctgctctcggtgctcggc
gcttccgtcaccgggggctacgtcgccgcattcctggcggcggttctttctgccctcgcc
tacaacttcttcttcatagacccgcagcgcaccttcacgattgccgcgccgcatgaagtc
tttgcgcttttcgtgtttctgatcgtggcgatgattgcgggtggtttcgcctcccgcatc
cggcaacaggcagaggtggcaggcctgcgggcaacggagcttcagtcgcttcacgatttc
tcgcgcaagctcgcaacgacggaaaagagcgaggacgcgatctggctggccgtttcgcaa
ctccagtcgcgtttgcggcgcaacgtcgttttcctgcttgcccgcaagggcgacctcggt
gtcgcggcggcctggccaccggatacggaccttgacgttaccgacctcaccgccgcgcgc
tggaccaacgacaaacgcgagccggcgggccgcggcaccgggacacttcccaacagccgt
ttcgagttccgcccgttgcttggccctcatggcatcgtcggggtctgtggcgtcgagcat
gccgacgagccgctcgacctgaatgcggagcgcatgctgagcgccgttctcgaccagacg
gctatcgctctcgatcgtgcccggctggcggatgagacgatcgtccaggcggcgcgtctg
gagggggagcgctatcgcgacgcgctgctgtcatccatttcgcatgacctgaggacgccc
ctcgccaccatcaccggcgccgtcaccgcgcttcgcgagctcggcgaacggatgagcgcg
gagagccgcagcgacctcctgcaatcgatcgaggaggaaagcggccggatgagccgtttc
gtcgccaacctgctcgacatgacgcggatcgaggcgggcacgttgaaaccgaagcgggac
tggatcgacgtcaccgacgtggtgcagtccgccgtcgagcgcacgcgcaagcacgccccg
ggacagatcatcgaaaccagcattgcgaccgatctgccgttgatacgcggcgacagcgtg
ctcatctcgcaggtgctgttcaatctgctcgacaatgccatcaagtatggggccggggag
ccggtgaatgtctatgcgcgtcgtgagggcaaggatgtgatcatctccgtcaccgatctt
ggcaagggcatcccaccagaagacctggaccgcatcttcgaaaaattctatcgccgtgga
aacccggacgggcgcgcgcccggcacagggctcgggctatccattgcgcgcggcttcatc
gaggcgatgggcggaaagatccatgccgagagcccggctctccggaagcggggcacgcgc
atcgtgatgcggtttcccggaagtgcagaagcaaggggcaatgcctga
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