Shinella oryzae: K6301_18955
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Entry
K6301_18955 CDS
T08112
Name
(GenBank) response regulator
KO
K07667
two-component system, OmpR family, KDP operon response regulator KdpE
Organism
soj
Shinella oryzae
Pathway
soj02020
Two-component system
soj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K6301_18955
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K6301_18955
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
soj02022
]
K6301_18955
Two-component system [BR:
soj02022
]
OmpR family
KdpD-KdpE (potassium transport)
K6301_18955
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
Motif
Other DBs
NCBI-ProteinID:
UPA27623
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All DBs
Position
pZ25:607578..608267
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AA seq
229 aa
AA seq
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MNQSRILVVDDEPQIQRFLKPSLIAAGYEVIEALNGGEALKFVATQAPDLVILDLGLPDM
DGKAVIASLRAWSDIPIVILSARDRESEKIAALDLGADDYVEKPFGIGELTARIRTALRH
RGRRDAIPSVMDVDDLTIDPIKRLVSREGETVHLTPKEYDLLLLLARHAGRVVTHRTLLT
SVWGPAHGEDLHYLRVFIGQLRQKIERDPTQPRIVRTEPGVGYRMAEPD
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagtcccgtatccttgtcgtggatgacgaaccgcagatccagcgcttcctgaag
ccctcgctgatcgccgcaggctatgaggtgatcgaggccctaaacggcggcgaagcgctc
aagttcgttgccacccaggcgcccgatctcgtgatcctcgatctcggcctgccggacatg
gacggcaaggcggtgatcgcgagcctccgggcatggtcggacatcccgatcgtcatcctc
tcggcccgcgaccgcgaaagcgagaagatcgcggccctcgatcttggagccgacgactac
gtcgaaaaaccgtttggcatcggggagctgaccgcacgcatccgcactgcgctgcgccat
cgcggccggcgggacgccattcccagcgtcatggacgtggacgacctgacgatcgatccg
atcaagcggctcgtctcgcgcgaaggcgagaccgtgcacctgacgcccaaggagtatgac
ctgctgcttctgcttgctcgccacgccggccgcgtggtcacccaccgaaccctgctgacg
agtgtctggggtcctgcccatggcgaggaccttcattatctgcgggtcttcatcggccag
cttcgccagaagatcgaacgggatcccacccagccgcggatcgtgcgcacggagcctggc
gtcgggtaccgcatggctgagccggattag
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