Shinella oryzae: K6301_19230
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Entry
K6301_19230 CDS
T08112
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
soj
Shinella oryzae
Pathway
soj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K6301_19230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_19230
Transporters [BR:
soj02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
K6301_19230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
UPA27676
LinkDB
All DBs
Position
pZ25:complement(664936..665946)
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AA seq
336 aa
AA seq
DB search
MRTILAMTAMATLLAGTIANAADTTLTISSYGGVYQEAQSKSYFQPFMAENPGIKIVEDS
SSSNAKLKAMVETGNVTLDLVVTDDSFGLDSDAQWLEPIDYSVVDKSKFIEGAAGTYRVA
ADIEGTVLAYNAEEFGGEAPKGFADFFNTEKFPGSRAVWKYAASGIFEAALIADGVKPED
LYPIDVERALKKLDTIKEDLVWWESGSQSEQLLSSGEASMALVWVGRAVNVAEKGIKIDW
TNWTSQTGYWVVPKGTKNKEAAMKAINFFTEPTQQIAFTKYMPYGPSNKNALASVDAKFK
GSLPTDHLDTRVMMNADWWAENGAKVDLRFQEWLLQ
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgcgtactattcttgcaatgactgccatggcgacgcttctcgccggtacgatcgccaac
gctgctgatacgacactgacgatctcgagctatggcggcgtctaccaggaggcccagtcg
aaatcctatttccagccctttatggctgagaatccgggtatcaagatcgtcgaagacagc
tcgtcgagcaacgccaagctcaaggcaatggtggaaaccggcaacgtcacgctggacctc
gtcgtaaccgatgacagtttcggcctcgacagcgatgcgcagtggctggagcccatcgat
tattctgtagtcgacaagtccaagtttattgaaggtgctgccggcacgtatcgcgtggcg
gccgatatcgaagggaccgtgcttgcctataatgccgaagaattcggcggcgaggcgccg
aagggttttgcggacttcttcaataccgagaagtttcccggctcgcgcgcggtttggaaa
tatgcggcgtcgggcatttttgaagccgctcttattgccgatggcgtgaagcctgaggat
ctttatccgatcgatgtcgagcgtgcgctcaagaagctcgatacgatcaaggaggatctc
gtctggtgggaaagcggttcgcagtccgaacagcttctttccagcggcgaggcgagcatg
gcgctcgtctgggtcggccgtgccgtcaacgttgcggagaagggcatcaagatcgactgg
accaattggacgtcgcagaccggatactgggtcgtgcccaagggcacgaagaacaaggaa
gcggcgatgaaggcgatcaatttcttcaccgagccgacccagcagatcgccttcacgaag
tacatgccctacggcccgtccaacaagaacgcgttggcttctgttgatgccaagttcaag
ggcagcctgccgacggaccacctcgacacgcgcgtcatgatgaatgctgactggtgggcc
gaaaacggcgccaaggtcgacctgcgcttccaggaatggcttcttcagtaa
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