Shinella oryzae: K6301_19405
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Entry
K6301_19405 CDS
T08112
Name
(GenBank) hypothetical protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
soj
Shinella oryzae
Pathway
soj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K6301_19405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_19405
Transporters [BR:
soj02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
K6301_19405
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GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
UPA27705
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All DBs
Position
pZ25:complement(701090..702241)
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AA seq
383 aa
AA seq
DB search
MFDTKLTRRSVLVAGATTALAMPFVRPSWAAPDTVRALMWEAYLLPDQITAFEEANKVKF
VPSFFDGNSEAYNKLRVGGSKEFDLVQADGFWPQLYFREGLLRAVDYSKVPNASGYLPEF
EAEAFKVLSDPQSGKKIGFPFCWGAYGITYDAGKVPPERTETLECMFSSDYSGMLSTSAR
FEENIALAALLVTDRLGSRDKPRPDGKPFNPYVLSDEELAEVEKLLIQQKSLLLTRYQDN
PTLFQLLQSGAVVAATEFAQVFRQLLTAEAQGAAPVDFRHALKMKEGGLGWVDTWLVTSG
VQDGAKFDLCNSFIDLMISPAVMKKIGEVAGCSTTVDLRAISNETERKLFLMDRSNEIAD
LFMFDQPSSPEKWERVWSNVQAA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacaccaagcttacgcgcagaagcgttcttgtcgccggcgccactacagcgctc
gctatgccttttgtgcgcccgtcctgggcagccccggatacggttcgtgcgttgatgtgg
gaagcctatctgcttcccgaccagatcacggccttcgaggaggcaaacaaggtcaagttc
gtcccttccttcttcgacggcaattcggaagcctacaacaagcttcgcgtcggcggttcg
aaggaattcgatctcgtgcaggccgacggattttggccgcaactgtatttccgtgagggg
ctgttgcgggcggtggattattccaaggtcccgaacgcctccggttatctgccggaattt
gaagccgaagcgttcaaggtcctttccgatccccaatccggcaagaagatcggcttcccg
ttctgctggggcgcgtacggtattacctatgatgccggcaaggtcccgccggaacgaacc
gagacgctcgaatgcatgttcagttccgactactcgggcatgctgtcgaccagcgcgcgc
ttcgaggagaacatcgcgcttgcggcactcctggttacggatcgcctcggcagccgggac
aagccgcgtccggacggaaagccgttcaatccgtatgtcctgtccgatgaagagcttgcg
gaggtcgagaagcttctgatccagcagaagagcctgcttctcacccgctaccaggacaat
ccgacgctgttccagcttctgcaaagcggcgcagtcgtcgccgcgaccgagttcgcacag
gtcttccggcagttgctgacggccgaagcgcaaggcgccgcgccagtcgatttccggcat
gcgctgaagatgaaggaaggcggtctcggctgggttgatacctggctggtgacctcgggc
gtgcaggacggtgcgaagttcgatctctgcaacagcttcatcgatctcatgatctcgcct
gcggtcatgaagaagatcggcgaggtggcgggatgctcgacgacagtcgatctgcgtgcg
atctcgaatgaaaccgagcgaaaactgttcctgatggatcgctcgaacgagatcgccgac
ctcttcatgtttgatcagccttcctcgcccgagaagtgggaacgcgtctggtcgaacgtt
caggccgcctga
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