Shinella oryzae: K6301_19895
Help
Entry
K6301_19895 CDS
T08112
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
soj
Shinella oryzae
Pathway
soj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K6301_19895
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_19895
Transporters [BR:
soj02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
K6301_19895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
UPA27792
LinkDB
All DBs
Position
pZ25:800403..801473
Genome browser
AA seq
356 aa
AA seq
DB search
MKKISRALALTMTCALALPAFAQDKPVAGEVKEGSLKGKTLTFVSYGGIYQDGQVAALKE
FVDKSGVTLLNDGPTEIAKLKAQVDAGNVTWDVVDTADLPPYVHCGTLFQKLDLSKLDVS
KIPQGQVGECSVPAMNYGVVLMYKNEAYKDNPPKSWADFFDTEKFPGVRAIDGSGDPTGG
LIEQAFMAAGGDPKAMTPDDIEKGIQKLRDLGPDTIYWKTGAESQQLAESGEADMIMMWT
GRAMTAVKNGAAYTPVWQDWLVVMDQLTIPVGVKDTDAAYALINAYLGANAQAVLTEKTS
YTPINMDAKPKVDEATAAFLTSTPERNAQGYQQNIPFWVKNFDLAAEKWNALLSGN
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatttcgagggccttggccctaacgatgacgtgcgccctggcgttgccggca
ttcgcacaggacaagccggtcgcaggcgaggtcaaggaaggatcgctgaagggcaagacc
ctgaccttcgtgtcctatggtggcatctatcaggatggtcaggtcgccgccctcaaggaa
ttcgtcgacaagtccggcgtgacgctgttgaacgacggcccgaccgaaatcgccaagctg
aaggcgcaggtcgatgccgggaacgtcacctgggacgtggtcgataccgccgacctgcca
ccctatgtccattgcggcaccctcttccagaaacttgatctttccaagctcgacgtctcg
aagatcccccagggccaggtcggcgaatgctcggttccggcgatgaactacggcgtcgtc
ctcatgtacaagaacgaggcctacaaggataacccgccgaagagctgggccgacttcttc
gacaccgagaagttcccgggcgttcgcgccatcgacggctcgggcgatccgaccggcggc
ctgatcgagcaggctttcatggcggccggcggcgatccgaaggcgatgacaccagacgat
atcgaaaaaggcatccagaaactgcgcgatctcggccccgacacgatctactggaaaacc
ggcgcggagagccagcagcttgccgaatccggcgaagccgacatgatcatgatgtggacc
ggccgcgcgatgacggccgtcaagaacggcgcggcctatacgccggtctggcaggattgg
ctcgtcgtcatggaccaactgaccatcccggtgggcgtcaaggatacggatgcggcctat
gcgctcatcaacgcctatctcggcgcgaacgcgcaggccgtgctcacggaaaaaacctcc
tacacgcccatcaacatggacgcgaagccgaaggtcgacgaggcgacggctgccttcctc
acctcgacgcccgaacgcaacgcgcagggttatcaacagaacatcccgttctgggtgaag
aacttcgatctcgccgccgagaagtggaatgcgcttctttccggcaactga
DBGET
integrated database retrieval system
