Shinella oryzae: K6301_19960
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Entry
K6301_19960 CDS
T08112
Name
(GenBank) IclR family transcriptional regulator
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
soj
Shinella oryzae
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
soj03000
]
K6301_19960
Transcription factors [BR:
soj03000
]
Prokaryotic type
Helix-turn-helix
IclR family
K6301_19960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_20
TrmB
RPA_C
HTH_69
Fe_dep_repress
HTH_PafC
Rrf2
DUF742
MarR
Motif
Other DBs
NCBI-ProteinID:
UPA27805
LinkDB
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Position
pZ25:814165..814917
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AA seq
250 aa
AA seq
DB search
MSGRGVERVLDMIEWFAASPEGASLSEIAAALAMPKSSALLMLQSLTERGYIHRLGSGEY
QLLRLPGEISPDGRNYGALIALVSPYLADAVQQSGETGFVAVLEGPSIRYLNKVLPKREI
LYDRDIGPTRPAHKVASGVVLLAAGSDAEIEAYAVSASLSEAERSKLLDAVESARKSGFY
VNPMGIVEGAAGAAAPIMGANGKAIAALNISGPQVRFVKNSDRISEVVRETAVTISEELA
RRSRRLSKGR
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggacgcggagtggagcgtgtcttggacatgattgagtggtttgccgcctcaccg
gaaggcgcaagcctctccgagatcgcggctgctctcgccatgcccaagtcgagcgcgctt
ctgatgctgcagtcgctgaccgaacgcggctacattcatcgtcttggcagcggcgaatac
caactgctcaggctgccgggcgaaatatcgccggacggccgcaattacggtgcactcatc
gctctcgtttcgccctatcttgcggacgcagtccagcagagcggcgagacaggctttgtc
gccgtcctggaaggcccgtccatccgctatctcaacaaggtgctgccgaaacgcgaaatt
ctctatgatcgcgatatcggtcccacacgccccgcgcataaagtcgccagcggcgtggtc
ctgctggcagccggaagcgacgcggaaatcgaggcttacgccgtgtccgcctcactgtcc
gaggcagagcgttcgaagctcctggacgccgtcgaaagcgcccgcaaatcaggcttctac
gtcaatcccatggggatcgtcgaaggcgcagcgggcgccgccgcgccgatcatgggcgca
aacggcaaggcgatcgccgcgctcaacatctccggacctcaggtccggttcgtcaagaat
tccgaccgcatttctgaagtggtccgggaaacggcggtgacgatcagtgaggagctggcg
cgccgcagtcgtcgtttatccaaagggaggtaa
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