Shinella oryzae: K6301_20000
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Entry
K6301_20000 CDS
T08112
Name
(GenBank) HAMP domain-containing methyl-accepting chemotaxis protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
soj
Shinella oryzae
Pathway
soj02020
Two-component system
soj02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K6301_20000
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
K6301_20000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
soj02035
]
K6301_20000
Bacterial motility proteins [BR:
soj02035
]
Flagellar system
Chemotaxis proteins
MCPs
K6301_20000
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
4HB_MCP_1
DUF948
Laminin_II
EXOC6_Sec15_N
FH2
Motif
Other DBs
NCBI-ProteinID:
UPA27813
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Position
pZ25:complement(822721..824541)
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AA seq
606 aa
AA seq
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MASIQHKITAASIAIFLIAGGAAGVGIWSASTMNADAVDIAGSGQILRNHMQADMMHDAL
RADVLAALHASNPAAGIKFDQVKADLAEHIASFRSVIDENKVLAKDPVTQKALADVEPPL
LTYIDSATKMVAAAEKSPVDAMTALPDFMTQFSALESAMEHAGDQIETVTASISDQSTQT
ANTINDMLKAILGLTLILSIALFVFFRRSVTAPILQLSAGMVKIADGDTDVNCAGLGRKD
EIGTMAAAVEVFRKAAIAKRQLEMEAAQAREQAESDRIATQQKAEADAAERLRIATSGLA
GGLKRLASGDLAFQLNEPFSPDFESLRHDFNASLSQLGGTLMAISQAISAIDGGTQEISS
GANDLAHRTERQAASLEQTAAALDEITANVSNSSKRTEEARAAATEADHGAVRSVDVVRQ
AEEAMQRIESSSQQISNIIGVIDEIAFQTNLLALNAGVEAARAGEAGKGFAVVAQEVREL
AQRSATAAKEIKALINTSSAEVGSGVRLVRETGVALNEIGERISGINQHMNAIATAAKEQ
SVGLVEVNKAVNTMDQTTQQNAAMVEQSTAASMNLAAEARKLRDLVGQFRFDDAATPGAS
RLQMAS
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaattcaacacaagatcaccgccgcgagcattgccatatttctcatcgcaggg
ggcgctgccggcgtcggaatctggtcggcgtctacgatgaatgcggatgccgtcgacatt
gccgggtcggggcagatccttcgcaatcacatgcaggccgacatgatgcatgacgccctt
cgcgccgatgtacttgccgcgctgcatgcctccaatcccgcggccggtatcaagttcgac
caggtgaaagccgatctcgcggagcatatcgcctcgttccgcagcgtgatcgacgagaac
aaggtgctggcgaaagatcccgtcacgcagaaggcgcttgcagatgtcgagccgccgctc
ctcacctacatcgacagcgccaccaagatggtggcagcggcggagaaaagccctgtcgat
gcgatgactgcgctaccggatttcatgacgcagttctcggcgcttgaaagcgcgatggag
cacgccggcgatcaaatcgagacagtcaccgcatcgatctccgaccagagcacccagacc
gcgaacaccatcaacgacatgctgaaagccattctcggactgacgctgatcctgtccatc
gccctttttgtcttcttccgtcggtccgtgacggctcctattcttcagctctcggcaggc
atggtgaaaattgccgatggtgatacggatgtgaattgcgccgggcttggtcgcaaggac
gagatcgggacgatggccgccgcggtcgaggtgttccgcaaggcggcgattgccaaacgc
caactcgagatggaggctgcgcaggctcgcgagcaggcggagagcgaccgtatcgcgacg
cagcagaaggcggaggccgacgcggctgagcggctgcgcatcgcaacctccggcctcgcc
ggtggcctcaagcgcctggcatcaggcgatcttgctttccagctcaacgagccgttttcg
ccggatttcgagagccttcgccacgatttcaatgcgtccctgagccagctgggcggaacg
ctgatggcgatctcccaggcaatctcggccatcgacggcggcacgcaggaaatctcgtcc
ggcgccaacgatcttgctcaccgcacggaacgtcaagcggcctcactcgaacagaccgcg
gccgcactcgatgaaatcacggcgaacgtgagcaattccagcaaacgcaccgaggaggcc
cgcgcggccgcaacggaggctgaccatggcgctgtccgatcggttgacgtggtacgccag
gcggaggaagcgatgcagcggatcgagagctcctcgcaacagatttcaaacattatcggg
gtcatcgatgagatcgccttccagaccaacctgcttgcgctgaacgccggcgtcgaagcc
gcgcgtgccggggaagccggcaaggggttcgccgttgtcgcccaggaagtccgtgaactc
gcgcagcgctctgcgacagccgccaaggagatcaaggcgctgatcaacacgtcgtctgcg
gaagttggaagcggcgtgcgccttgtgcgcgagacgggcgtcgcgctcaacgagatcgga
gagcgcatttccggtatcaaccagcatatgaacgccattgccacggcggccaaggaacag
tcggttggcctggtggaagtcaacaaggccgtcaacaccatggaccagacgacccagcag
aatgccgccatggtggaacaatccaccgcagcgtccatgaaccttgctgccgaagcccgt
aaactgcgtgatttggtggggcagttccgtttcgatgatgccgccacgccaggcgcttcg
cgacttcagatggcctcgtaa
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