KEGG   Shinella oryzae: K6301_20105
Entry
K6301_20105       CDS       T08112                                 
Name
(GenBank) response regulator transcription factor
  KO
K07684  two-component system, NarL family, nitrate/nitrite response regulator NarL
Organism
soj  Shinella oryzae
Pathway
soj02020  Two-component system
Brite
KEGG Orthology (KO) [BR:soj00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    K6301_20105
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:soj02022]
    K6301_20105
Two-component system [BR:soj02022]
 NarL family
  NarX-NarL (nitrate respiration)
   K6301_20105
SSDB
Motif
Pfam: Response_reg GerE Sigma70_r4_2 Sigma70_r4 HTH_38 HTH_23 HTH_40 HTH_30 SAM_DrpA HTH_29 HTH_20
Other DBs
NCBI-ProteinID: UPA27829
LinkDB
Position
pZ25:843101..843760
AA seq 219 aa
MNTIRVAVVDDHPIFREGVASCLTDIGGYDIVGEGGSSEDAQAIAQQSSPDVMLLDISMP
GGGLNAVEAILDRQPSQKIIMLTVSESHSDIATALKLGAKGYVLKGVGSRMLSEIVRAVH
GGEMYLSPALSARMIAGISQTGNPSSATGIHELTERERDVLRLVAAGLSNKRIARDLDLH
EKTIKHHLTRIFAKLKVSNRTEAAMAFRDAGEAARPSAG
NT seq 660 nt   +upstreamnt  +downstreamnt
atgaacaccatccgcgttgcggtcgtcgacgaccatcccatcttccgcgaaggggtggca
agttgcctgacggacatcggcggttacgatatcgtcggcgaaggtggcagtagcgaggac
gcccaggcgatcgcccagcagtcgagtcccgacgtcatgctgctggatatctcgatgccg
ggcggaggtctgaatgcggtggaagcgatcctggaccggcaaccctcgcagaaaatcata
atgctgaccgtatcggaatcgcattccgacattgcgacggccttgaaactgggtgccaaa
ggctacgtgctcaaaggtgtagggtcgcgaatgctttccgagatcgtgcgtgccgtccac
ggcggcgagatgtatctttcgcccgcgctgtccgcacgaatgattgccggcatttcacaa
acaggaaacccgtcaagcgcgacagggattcatgagcttaccgagcgcgagcgtgatgtg
ctgcgtcttgtggcagcaggcctgagcaacaagcggattgcccgcgatctcgaccttcat
gaaaagacgatcaagcaccatttgacgcgcatattcgccaaactcaaagtcagcaaccgg
accgaggcggctatggcattccgggatgcaggcgaagcggctcggccttccgccggctag

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