Shinella oryzae: K6301_20200
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Entry
K6301_20200 CDS
T08112
Name
(GenBank) glycosyltransferase family 2 protein
KO
K16564
succinoglycan biosynthesis protein ExoU [EC:2.4.-.-]
Organism
soj
Shinella oryzae
Pathway
soj00543
Exopolysaccharide biosynthesis
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00543 Exopolysaccharide biosynthesis
K6301_20200
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
soj01003
]
K6301_20200
Glycosyltransferases [BR:
soj01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
K6301_20200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
Glyco_tranf_2_3
Glyco_tranf_2_2
Glyco_tranf_2_4
DUF6245
DUF373
Motif
Other DBs
NCBI-ProteinID:
UPA27846
LinkDB
All DBs
Position
pZ25:860005..861000
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AA seq
331 aa
AA seq
DB search
MIQQEKVCVIIAAKNAEKTIGRAVRSALAQPEVDEVVVVDDGSDDRTLSAAAAADDTSRR
LDIIRFRTNRGPSAARNHAIAVSRAPLISILDADDFFFPGRFKRMLACPDWDFIADNIAF
MPEAELTRQPDDFAPRPRRLGLADFVLGNISRRGAPRGELGFLKPVMRRAFLDANDLRYR
EDMRLGEDYELYVRALLAGARYTVIESCGYGAVVRADSLSGQHRTKDLESLYQAERSILS
AGNVPSEAEHAMRRHCRQIGRRHALRHFLDRKREGGARAALAYAVENPSAMPAIAGDILR
DKLQAAQRRMGTEPSAPQDGLRYLLPASATR
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
gtgatccagcaagaaaaggtctgtgtcattatcgccgcgaagaatgcggaaaaaacgatc
ggccgggcggtgcgctccgcgctcgcgcagccggaggtcgacgaagtcgtggtggttgac
gacgggtcggacgaccgcacgctctcagcagcggccgcagcagacgatacgagccggcgg
ctcgacatcatccgattccgcaccaaccgggggccatcggccgcgcgcaaccacgccatc
gccgtatcccgcgcacctttgatcagtattctcgacgcggatgatttcttctttcccggt
cgcttcaagcgcatgctcgcctgcccggactgggatttcatcgccgataacatcgccttc
atgccggaggccgaactcacccggcaaccggacgatttcgcgccgcgcccgcgtcggctc
ggccttgccgatttcgttcttggcaacatttcccggcgcggcgccccgcgcggcgaactc
ggtttcctgaagccggtcatgcgccgcgcgttcctcgatgcgaacgatctccgctaccgt
gaggacatgcgccttggcgaggactacgaactctatgtgcgagcgctgctcgcgggcgcc
cgctacaccgtcatcgaaagctgcggctacggcgcggtcgtgcgtgccgattccctgagc
ggccagcatcggacgaaggatctcgaatcgctctatcaggcggagcgctcgattctttcg
gcgggcaatgtgccatccgaggcggagcacgcgatgcgtcgccattgccgccagatcggc
cggcgccacgccttgcggcatttcctcgaccgcaagcgggagggcggcgcgcgcgcggcc
cttgcttatgcggtcgaaaacccctcggccatgccggccattgccggcgatatcctgcgc
gacaagttgcaagccgcgcagcgccggatggggacggagccttcggcgccgcaagacggg
ttgcgctacctgctacccgcctccgccacgcggtag
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