Shinella oryzae: K6301_20405
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Entry
K6301_20405 CDS
T08112
Name
(GenBank) sensor histidine kinase
KO
K10125
two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:
2.7.13.3
]
Organism
soj
Shinella oryzae
Pathway
soj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K6301_20405
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
soj01001
]
K6301_20405
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
soj02022
]
K6301_20405
Enzymes [BR:
soj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
K6301_20405
Protein kinases [BR:
soj01001
]
Histidine kinases
NtrC family
K6301_20405
Two-component system [BR:
soj02022
]
NtrC family
DctB-DctD (C4-dicarboxylate transport)
K6301_20405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
dCache_1
HisKA
HATPase_c_5
DUF6069
Motif
Other DBs
NCBI-ProteinID:
UPA27999
LinkDB
All DBs
Position
pZ25:903340..905145
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AA seq
601 aa
AA seq
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MALSGLCVLAYVVVVYGDRLATRSYLDEASLQAGSALRLTVSALSGHLSRYEPLPALIAD
HDDIKELVSDPDNAALVEAANLYLKEINALLESSDIYVMTMDGSTVAASNFESETSFIGE
NFSYRPYFQDAAKGGQSRFYALGTTSLKRGYYFASPVHVGEAIRGVIVFKVDIDTIETFW
RGGEYKILVSDPEGIIFMTGSPEWLYSSLLPLSPDRLERTQASRRYAEAVLKPLPFKHGE
LGSHNLMTIADGGSAREYLVLSQYMPQADWTVSVLMDTSSVRSQARTMLIAVVLFFCLAG
LGLAIVLQRRTRAAERLRMQIEARNELERRVEERTADLALVNRQIELEIAERRLTEQELR
KTQGDLIQAGKLAGLGQMSAALSHEFNQPLTAAKTYADSAAMLIDRGRVEEARDNVQRIS
RLVDRMAAISRHLRNFARKPNEKLGPVPIETVVGDTLEIVAARLKSADARLDIDLGPQPL
WVQAGSVRLQQVLVNIITNAADAVEGLEDRRIELVGRAQDGKVILTIRDHGPGVPAAISE
RIFDPFFSTKGVGRGLGLGLSISYNIIKDFGGGLSVSNKADGGAEFRIELDGALPAQEAA
E
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgtctgggctgtgtgtgctcgcctatgtcgtggtcgtgtatggcgaccggctg
gcgacgcgcagctatctggacgaagcgtcgctgcaggccggatcggcgttgcggctgacg
gtctcggcgctcagcggccatctcagccgctacgagccgctgccggcgctgatcgccgac
catgacgacataaaagagctcgtcagcgatcccgacaatgcggccctggtggaggcggcg
aacctctatctcaaggagatcaacgcgcttctggaatcctcggacatctatgtcatgacg
atggacggctcgactgtggccgcaagcaatttcgagtcggagaccagcttcatcggcgag
aatttcagctaccggccctacttccaggatgccgcgaaaggtggccagtcgcgtttctat
gcgctcggaaccacctccctgaagcgtggctactacttcgcctcgcccgtccacgttggc
gaggcaatccgtggcgtgatcgtcttcaaggtcgatatagacacgatcgaaaccttctgg
cgcggcggtgaatacaagatcctggtgtccgatccggaaggcatcatcttcatgaccggc
agcccggaatggctctattcgagccttctgcccttgtcgcccgaccggttggaacgcacg
caggcgtcgcgccggtatgcggaagccgtgctgaagccattgccgttcaaacatggagag
cttggctctcataacctgatgaccattgcggacggcggatcggcgcgggagtatctggtc
ctgtcgcaatacatgccccaggccgactggactgtcagtgtgctcatggacaccagctcg
gttcgcagccaggcgcggacgatgctgatcgccgtggttctgttcttctgcctcgcgggc
ctcggtctggcaatcgtcctgcagcgtcggacgcgcgccgccgaacggctgcgcatgcag
atcgaagcgcgcaacgagctggagcggcgggtcgaggagcggacggccgatcttgccctc
gtcaaccggcagatcgagctggagattgccgaacgtcggctgacggaacaggaactgcga
aagacgcagggcgatctcatccaggcgggaaagcttgccggcctcggccagatgtcggcc
gcgctgtcgcatgagttcaaccagccgctcaccgcggccaagacctatgccgacagcgcc
gcgatgctcatcgaccgcggccgcgtcgaggaagcgcgcgacaatgtccagcgcatttcc
cggcttgtcgatcggatggcggcaatcagccgtcacctgcgcaacttcgcacgaaagccc
aacgagaagctcgggcccgtcccgatcgaaaccgtcgtgggcgacaccctggagatcgtc
gcggcgcgcctcaaatcggccgatgcccggctggatatcgatctcggtccccagcctctg
tgggtccaggccgggtcggtacggttgcaacaggtgctggtcaacatcatcaccaatgcc
gccgatgccgtcgaaggtctggaggaccggcgcatcgaacttgtcggacgggcgcaggac
ggcaaggtcatcctgacgatccgggatcatgggccgggggttcccgcggcgatttccgaa
cggatcttcgatcctttcttcagcaccaagggcgtaggccgcggcctggggctcggcctc
tccatatcttacaacatcatcaaggatttcggcggcggcctgtccgtatccaacaaggcc
gacggcggcgcggagttccgcatcgagctggacggcgcattgccggcgcaggaggccgcc
gaatga
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