Shinella oryzae: K6301_20945
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Entry
K6301_20945 CDS
T08112
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
Organism
soj
Shinella oryzae
Pathway
soj02010
ABC transporters
soj02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K6301_20945
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
K6301_20945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_20945
Transporters [BR:
soj02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
K6301_20945
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
DUF5790
Motif
Other DBs
NCBI-ProteinID:
UPA26430
LinkDB
All DBs
Position
pZ25:complement(1001103..1002068)
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AA seq
321 aa
AA seq
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MKSIMQKAALLLSTAALAIALPLASAQAEEKVTIAVSIPAATHGWTGGVVYHAEQAEKEI
EAAFPNIDVVLSTASSATAQVSALEDLSASRKLDALVILPFTSEELTGPVEQIKQQGTFI
SVVDRGLTDPAVQDLYVAGDNIAVGANTAHWLVDKLGGEGQIVVLRGIPTVIDDERIKGF
SDVIAKSNIKILDIQYANWNQDEAFKLMQDYLAKYPKIDAVWANDDDMLLGVLEAVDNAG
RKDIKYALGGNGMKQVIEMVKEKNERTPISTPYPPSMIKSAIYMTAAQFAGQAPVRGSFL
LGAPLITPENADQFYFPASPF
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctatcatgcagaaagcagcactcttgctgtcaacggccgccctggccatcgcc
ctgccgctcgccagcgcccaggcggaggagaaggtgacgatcgccgtgtccattccggcc
gcaacgcacggctggacgggcggcgtggtctatcacgccgagcaggccgaaaaggagatc
gaggccgcgttcccgaacatcgacgtcgtcctgtccacggcgtcctcggcgaccgcgcag
gtttccgcgctggaggacctttcggcgagccgcaagctcgatgcgctcgtcatcctgccc
ttcacgtcggaggaactgacggggccggtcgagcagatcaagcagcagggcaccttcatc
tcggtcgtcgaccgcggcctgacggacccggcggtgcaggatctctatgttgccggcgac
aatatcgccgttggcgccaacaccgcgcactggctcgtcgacaagctgggcggcgaaggc
cagatcgtcgtgctgcgcggcattccgaccgtcatcgacgacgagcgcatcaagggcttc
tcggatgtgatcgccaagtccaacatcaagatcctcgacatccagtatgccaactggaac
caggacgaagccttcaagctgatgcaggactatctggcgaaatatccgaagatcgacgcc
gtctgggccaatgacgacgacatgctgctcggcgtgctcgaggccgtcgacaatgccggc
cgcaaggacatcaagtatgcgctgggcggcaacggcatgaagcaggtcatcgagatggtg
aaggagaagaacgagcgcacgccgatctccacgccctatccgccgtcgatgatcaagtcg
gccatctacatgaccgctgcccagtttgcaggccaggcaccggtgcgcggctccttcctg
cttggcgcgccgctcatcaccccggaaaatgcggaccagttctacttccccgcatccccg
ttctga
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