Shinella oryzae: K6301_21300
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Entry
K6301_21300 CDS
T08112
Name
(GenBank) GHKL domain-containing protein
KO
K10125
two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:
2.7.13.3
]
Organism
soj
Shinella oryzae
Pathway
soj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K6301_21300
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
soj01001
]
K6301_21300
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
soj02022
]
K6301_21300
Enzymes [BR:
soj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
K6301_21300
Protein kinases [BR:
soj01001
]
Histidine kinases
NtrC family
K6301_21300
Two-component system [BR:
soj02022
]
NtrC family
DctB-DctD (C4-dicarboxylate transport)
K6301_21300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
dCache_1
HATPase_c_5
HATPase_c_2
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
UPA26499
LinkDB
All DBs
Position
pZ25:1079226..1081067
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AA seq
613 aa
AA seq
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METSAASPDQTELSRIARRQWLAFAVVLLFALIGALHAAGLYGRASALAGLEEQGRTDAN
LKVALLRAVLERPRALPFLLSRDRDLADALTATDPAPRATLDRKLEELVAGTSAAVIYVM
DAAGMTISASNWREPTSFVGNDYSFRPYFFRAMQDGTAEHFALGSVSKRPGLYISHRIGP
PSAPLGVVVVKMEFDQLEQDWHETQRPSYVVDPGHVVLITSIPSWRFMTTQPLPAENLAA
IRESLQFGEAPLLPLPFMPTADDNIIRVVEPGGGSENYLRISVPVATTPWRFEYLVPVTE
AVAAGRRQAQLLALLLIGAATIAAAIWLRRRQTALAGAVRDQAAREELERRVVERTRDLS
LARDRLEAEIVDHHRTETQLQAVQQDLVQANRLAILGQVAAGVAHEINQPLATIRAYADN
AKVFLGRGRTEPVAENLDHIAGLTDRIATITEDLKALARKGRSGEEPVNLRAALDGAVLL
LRSRFTGRLDRLIIAPFPAGLEVMGNRLRLEQVFINLFQNALEAVAEKADGRVDVTVEEN
GTEIALTVADNGPGLSDTILASLFEPFNTSKEAGLGLGLVIVKDIVSDYGGRLEVETDTR
GARFRVHLRKAAP
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggaaacatctgcggcgagccccgaccagacagagctttcgcgcatcgcgcggcggcaa
tggctcgcctttgcagtcgtgctgctgtttgcattaatcggtgcgctccatgccgccggt
ctttacggccgcgcctccgcgctggccggtctggaggagcagggccgcaccgatgccaat
ctgaaggtcgcgctgctgcgcgccgtgctggagcgcccacgcgccctgcccttccttctt
tcgcgcgaccgcgatctcgccgatgccctgaccgccaccgatcctgcgccgcgcgccacg
cttgatcgcaagctggaggaactggtggccggcaccagtgccgcggtgatctatgtgatg
gatgcggccggcatgacgatatcggccagcaactggcgcgaaccgacgagtttcgtcggc
aacgactattcgttccgcccctatttcttccgcgcgatgcaggacggcacggcggagcat
ttcgcgctcggatccgtcagcaagcggccgggtctctatatctcgcaccggatcggcccg
ccgtccgcgccgctcggcgtcgtggtcgtcaaaatggaattcgaccagctcgaacaggac
tggcatgaaacgcagcgcccctcctatgtggtcgatcccggccatgtggtgctgatcacc
agcatcccgtcctggcgcttcatgaccacgcagccgctgcccgccgaaaacctcgcggcc
atccgcgagagccttcagttcggcgaggccccgcttttgccgctgcccttcatgcccacg
gccgacgacaacatcattcgcgtcgtcgaaccgggcggcggaagcgagaactatctgcgc
atttcagtacccgtggccacaacgccctggcggttcgagtatctcgtaccggtgacggag
gcggttgcggccggacggcgtcaggcacagttgctggccctgctcctcatcggcgcggcc
accattgccgccgcgatatggctgcgccgccgccagaccgcgcttgcgggcgcggtacgc
gaccaggcggcacgcgaggagctcgagcgccgggtggtggagcgcacgcgtgacctcagt
ctcgcccgtgaccgcctggaggccgaaatcgtcgatcaccatcgaaccgagacgcaattg
caggccgtgcagcaggatctggtgcaggccaaccggcttgccatccttggccaggtggcc
gccggcgtggcgcatgagatcaaccagccgctcgccaccatccgcgcctatgccgacaac
gccaaggtcttcctcgggcgcggccgcacggagccagtggcggaaaatctcgatcatatc
gccggcctgacggaccgcatcgcgacgatcacggaagacctgaaggcgttggcgcgcaag
ggccgctcgggcgaggagccggtcaacctgcgcgcagctctggacggcgccgtcctgctg
ctgcgcagccgcttcaccggccgtctcgatcgcctgatcatcgcccccttcccggccggc
ctggaggtcatgggcaaccggcttcggttggaacaggtgtttatcaacctcttccagaac
gcactggaagcggttgcggaaaaggcggacggccgggtggatgttaccgtcgaggaaaac
gggacggaaatcgccctgacggttgcagacaacggtcccggcctttcagacacgatcctc
gcctccctgttcgagcccttcaacacgtccaaggaggcaggcctggggctcggtctcgtc
atcgtcaaggacatcgtttccgattacggcggccggctggaggtggaaacggacacgcgt
ggtgccagattccgcgtgcatctcagaaaggctgcgccatga
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