Shinella oryzae: K6301_21405
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Entry
K6301_21405 CDS
T08112
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
Organism
soj
Shinella oryzae
Pathway
soj02010
ABC transporters
soj02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K6301_21405
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
K6301_21405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_21405
Transporters [BR:
soj02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
K6301_21405
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
UPA26520
LinkDB
All DBs
Position
pZ25:complement(1106066..1107094)
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AA seq
342 aa
AA seq
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MRTFFTTTAMAVLATTLFAGAAAAETESPFRCKPGEKYVMNVMVSGVEYWFPVYEMFKQA
GQQMGCETEYTGTPEYDVNKQIATFDQALAQNPAGILVHPMNSDPFIEPINRAIEQGTAV
VTFAADSPLSKRVSFITSDNTREGTYAADAIAEKMGGKGEYAVLENPGQDNHDKRIAAFI
ARMEEKWPDMKLVGRAASNQDPTKAYQGLSSIIQANPDLGAVFMPEASSAIGAAQAAKEA
GGKVLVMCADVNANILDMIKAGEVFGSINPNQGMQGYMGFMLLWLAKHPELIDPMNDAKR
AGFNPMSIPVVDNGLSVVTAENADDFYWDKYLKRRGTKGIEE
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcacttttttcacgacgaccgccatggcggttcttgcgacgacgctttttgccggt
gcggccgctgccgagacggaaagcccgttccgctgcaagccgggcgagaaatacgtcatg
aacgtcatggtatccggcgtcgaatactggttcccggtctatgagatgttcaagcaggcc
ggccagcagatgggctgcgagaccgaatataccggcacaccggaatatgacgtcaacaag
cagatcgccaccttcgaccaggcgctggcgcagaacccggccggcattctcgtgcatccg
atgaattcggatccgttcatcgagccgatcaaccgcgccatcgaacagggcacggccgtg
gtgaccttcgccgccgactcgccgctgtcgaagcgcgtttccttcatcacctctgacaac
acgcgcgaaggcacctatgctgcggacgcgattgccgagaagatgggcggcaagggcgag
tatgcggttctggaaaatcccggccaggacaaccacgacaagcgcatcgcggccttcatc
gcccgcatggaagagaagtggccggatatgaagcttgtcggccgcgcggcctccaaccag
gatccgaccaaggcgtatcagggtctttccagcatcatccaggccaatcccgatctcggc
gccgtcttcatgccggaggcaagctcggccataggcgcggcacaggcggcgaaggaagcg
ggcggcaaggttctcgtcatgtgcgcggacgtcaacgccaacatcctcgacatgatcaag
gccggtgaggtcttcggctcgatcaacccgaaccagggcatgcagggctatatgggcttc
atgctgctgtggcttgccaagcatcccgaactgatcgatccgatgaacgacgccaagcgc
gcgggcttcaacccgatgagcatcccggtcgtcgataacggcctgtccgttgtgacagcc
gaaaacgccgacgatttttactgggacaagtacctgaagcgccgcggcaccaagggcatc
gaggagtaa
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