Shinella oryzae: K6301_21475
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Entry
K6301_21475 CDS
T08112
Name
(GenBank) PAS domain-containing methyl-accepting chemotaxis protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
soj
Shinella oryzae
Pathway
soj02020
Two-component system
soj02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K6301_21475
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
K6301_21475
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
soj02035
]
K6301_21475
Bacterial motility proteins [BR:
soj02035
]
Flagellar system
Chemotaxis proteins
MCPs
K6301_21475
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MCPsignal
PAS_3
PAS_4
PAS_9
PAS
COG6_N
Motif
Other DBs
NCBI-ProteinID:
UPA26534
LinkDB
All DBs
Position
pZ25:complement(1124728..1126443)
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AA seq
571 aa
AA seq
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MTSVWTKFRGGATADAVLAAIGKTFAVIEFDAAGNVLSANENSLRVMGYSKSELAGQHHK
MFVDPAYAASEDYAVFWRKLLRGECDAAEYKRIGKGGREVWIQASYNPVVSSSGKVLKIV
KFATDITAEKMRAAEAIGKLVALSRAQAIIEFTLDGHVLTANDNFLAVLGYDLAEIVGRA
HSMFVEPAYAQSADYAAFWQRLQRGEFVAAEFKRIGKGGREVWIQASYNPIFDPDGRVVK
VVKFATDITARVKAVTTIGAGLAQVAGGNLTCELNEAFIPALDQLRLDFNASVATLRTAL
RKVGENAFSIDASAGELSAAASNLSMRTERQAASVEETAAALDEITATVKSSVARAEEAG
QIVARTKASAELSETVVKRAVATMGEIESSSREISSITDMMDEIAFQTNLLALNAGVEAA
RAGEAGKGFAVVAQEVRVLAQRSAEAAKQIKDLIRKSNDEVRSGVKLVGETGAALEQIIR
DVQEVSSNVVAIIEASREQSTGLAEINAAVGTVDQGTQQNAAMVEQTSAASANLASQSQA
LNALLATFQLGGTVLSPRHATGRTSARLAAA
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcgtctggacgaaattcaggggcggagcgacggccgatgccgttcttgccgcc
atcggcaagactttcgcggtcatcgagttcgacgccgccggaaacgtcctctccgccaat
gagaactccctgcgcgtcatgggctacagcaagagcgagcttgcgggacagcaccacaag
atgtttgtcgatcccgcctacgcggccagtgaggattatgccgtcttctggcgcaagctc
ctgcgcggcgagtgcgatgccgccgaatacaagcgtatcggcaagggcggcagagaggtc
tggatccaggcgtcctacaatcctgtcgtcagcagcagcggcaaggtgctcaagatcgtt
aagttcgccaccgatatcaccgccgaaaagatgcgcgccgccgaggccatcggcaagctt
gtggccctctcgagggcgcaggcgatcatcgagttcaccctcgacggacatgtcctgacg
gcaaacgacaatttcctggcggtgctcggctatgaccttgcggaaatcgtcggtcgtgcg
cacagtatgttcgtggagccggcctacgcgcagagcgcggactacgcggcgttctggcag
cgcctgcaacgtggcgagttcgtggcggcggagttcaagcgcatcggcaagggcggcagg
gaagtctggatccaggcttcgtacaatcccatcttcgatccggatggccgggtggtcaag
gtcgtcaaattcgccaccgacatcacggcgcgcgtcaaggccgtcaccaccatcggcgcc
ggactggcgcaggtcgcgggcggcaatctcacctgcgagttaaacgaggcattcataccc
gccctcgatcagttgcgcctcgatttcaacgcctccgtcgcaacgctccggaccgcgctg
cgaaaggtcggtgaaaatgccttcagcatcgatgcgtcggccggcgagctgagcgcagcg
gcgtccaatctttccatgcgaaccgaaagacaggccgcgtccgtggaggaaacggccgcg
gccctcgacgagattaccgcgacggtgaaaagctccgtggcccgggccgaggaggcgggc
cagatcgtcgcgcggacgaaggccagcgccgagctttccgagacggtcgtcaagcgcgcc
gtcgccaccatgggcgagatcgaatcctcctcgcgtgagatcagttcgattaccgacatg
atggacgaaatcgccttccagaccaatctgctggcgctgaatgccggcgtggaagcggcg
cgtgcgggagaggccggaaagggctttgccgtcgtggcgcaggaagtgcgcgtgcttgcc
cagcgttccgccgaggccgcaaagcagatcaaggacctgatccggaaatccaatgacgag
gtccgttcgggcgtgaagctggtcggcgaaacgggtgcggccctggagcagatcatccgc
gacgttcaggaggtcagcagcaacgtcgttgccatcatcgaggcatcgcgcgagcagtcg
accggccttgcggagatcaacgccgccgtcggtacggtcgatcagggcacgcagcagaat
gccgcgatggtggagcagacatcggccgcgagcgccaacctcgcatcgcaatcccaggcg
ctcaatgcgcttctggccaccttccagctcggcggaacagtgctgtcgcctcgtcacgca
acgggtcgcacctcggccaggcttgccgcggcctga
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