Shinella oryzae: K6301_21515
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Entry
K6301_21515 CDS
T08112
Name
(GenBank) transporter substrate-binding domain-containing protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
soj
Shinella oryzae
Pathway
soj02010
ABC transporters
soj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K6301_21515
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K6301_21515
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_21515
Transporters [BR:
soj02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
K6301_21515
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_5
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
UPA26541
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All DBs
Position
pZ25:1134523..1135674
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AA seq
383 aa
AA seq
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MRNDDWRVGVLFSETGVTGAVERTQRAATFLAIDEINRAGGVRGRPIVPIAYNPASIPAN
YRDMALKLVDQDRVDVVFGCHMSSTRKAALPVIEARGALLFYPTLYEGFEYSRNCIYTGA
APNQNSVQLVQFLTQNYGDRVFLVGSNYVYPYESNRTIADLFLRGGGQVVDEMYVPLALD
DASIATIIERIRRTKPDVIYSTVVGDGIVPFFKAFKAAGFDSKHMPIASQSTSEADFRQL
APSVAEGHVTAAPFFSTIDRPKAREFVASYHKAFGDDVLPTAPAEAAYFQVHLFAQALER
TGSMALGDLLPALAGVEYDAPQGLVKIDGATNHTHLWPRVAKVNANGEYDIVYDPSVRVA
PDPFMLEYRPESAMSATRDAVGL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcggaatgatgattggcgcgttggcgtccttttttcggaaaccggggtgaccggcgcg
gtggagcgtacacagcgcgccgcgacattcctcgcgatagacgagatcaatcgcgccggc
ggggtgcgggggcggcccatcgtgccgatcgcctacaatcccgcgtccattcccgcgaac
tatcgcgacatggctttgaagctcgtcgaccaggaccgggtcgacgtcgtcttcggctgc
cacatgtccagcacacgcaaggccgcactgccggtgatcgaggcgcgcggcgcacttctg
ttctatcccaccctctacgagggcttcgaatattcgcgcaactgcatctatacgggcgcg
gcgccgaaccagaattccgtgcagctcgtccagttcctcacgcagaactacggcgaccgg
gtgtttctcgtcggctcgaactatgtctatccctatgaatcgaaccgcaccatcgccgat
ctcttcctgcgcggcggaggccaagtggtggacgagatgtatgtcccgctcgcccttgat
gacgccagcatcgcaacgatcatcgagcgtatccgtcgcacgaagcccgacgtcatctat
tccacggtcgtgggagacggcatcgttcccttcttcaaggccttcaaagcggcgggcttc
gattccaaacacatgcctattgccagccagtccaccagcgaggcggacttccggcagctg
gcgccaagcgtcgccgagggtcacgttacggcagcgccgttcttctccacgatcgaccgc
cccaaggcgcgggaattcgtcgcaagctatcacaaggcattcggtgacgacgtccttccg
accgcaccggccgaggcggcctatttccaagtccacctctttgcccaggccctcgaacgg
acaggcagcatggcgctcggtgatctgctgccagcacttgccggcgtcgaatacgatgcg
ccgcaggggctggtgaagatcgacggcgccaccaatcacacccatctgtggccgcgggtg
gcgaaggtgaacgcaaacggcgaatacgacatcgtctacgatccctccgtccgcgtcgcg
cccgatccgttcatgctggaatacagaccggagtcggcgatgtcggcgacccgcgatgcc
gtcggtctttag
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