Shinella oryzae: K6301_21550
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Entry
K6301_21550 CDS
T08112
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
Organism
soj
Shinella oryzae
Pathway
soj02010
ABC transporters
soj02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K6301_21550
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
K6301_21550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_21550
Transporters [BR:
soj02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
K6301_21550
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
UPA28010
LinkDB
All DBs
Position
pZ25:complement(1141447..1142559)
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AA seq
370 aa
AA seq
DB search
MATTVALTFASQALAQNFNDPAEFKKQREQLAMTPQGPEGQPWAQHLGEGMVDTAKYKKD
GHVTLCFSNAGVFNPWRVVGLNNLNAEADLHKDRLKELIVVDAEGKDDKQISDIESLVSG
GKCDALIVSPNTTAALTPAVEAACGKLPVIVFDRGVNTSCPVTYIHPVGGYGFGITSGEF
IAGKLKKGDNVLALRIMPGVDVLETRYSAAKNIFDEAGINVVGSEFTGSDRAKTKSVVED
YINRGVKIDAVWMDAGDTATAALEAFEDAGLPYPVISGEDQQDFLRKWQSDKLTAIGPSY
PTYQWRTAVIAALDVLDGKQVPGPEWVLPQPAITQDVLADHVDERMPPLHYSLCGCQDLP
GYPERWGGKK
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacggtggcgctcacattcgccagccaggcgctggcgcagaatttcaacgat
ccagccgagttcaagaagcagcgcgagcagctggcgatgacgcctcagggcccggaaggc
cagccctgggcgcagcatctcggcgagggaatggtcgatacggcgaagtacaagaaggac
ggccacgtcacgctctgcttctccaatgccggcgtcttcaacccctggcgcgtggtgggc
ctcaacaacctcaatgccgaggctgacctgcacaaggatcgcctcaaggaactcatcgtc
gttgatgcggagggcaaggacgacaagcagatttccgatatcgagtccctggtcagcggc
ggcaagtgcgatgcgctgatcgtgtcgccgaacacgacggcggcgcttaccccggctgtc
gaggcggcctgcggcaagctcccggtcatcgtcttcgaccgcggcgtcaacacgtcctgc
ccggtcacctatatccatccggtcggcggctacggcttcgggatcacgtcgggcgagttc
atagccggcaagctgaagaagggcgacaacgtgctggcactgcgcatcatgcccggcgtc
gacgtgctggagacgcgctactcggcagcgaagaacatcttcgacgaagccggcatcaac
gtggtcggctctgaatttaccggtagcgaccgggcgaagacaaagtccgtcgtggaagac
tacatcaatcgcggggtcaagatcgacgcggtgtggatggatgccggggatacggcgacg
gctgcgctggaagccttcgaggatgcgggcctgccctatcccgtcatcagcggcgaggac
cagcaggactttctgcgcaagtggcagtcggacaagttgacggctatcggcccatcctat
ccgacttatcagtggcgcacggccgttatcgcggcgctggatgtgcttgacggcaagcag
gtgcccggacccgaatgggtgcttccgcagccggcgatcacgcaggacgtgctggccgac
catgtcgacgagcggatgccgccgctgcactacagcctgtgcggctgccaggatttgccg
ggctatcctgagcgctggggcggcaagaagtaa
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