Shinella oryzae: K6301_21695
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Entry
K6301_21695 CDS
T08112
Name
(GenBank) GAF domain-containing protein
KO
K11354
two-component system, chemotaxis family, sensor kinase Cph1 [EC:
2.7.13.3
]
Organism
soj
Shinella oryzae
Pathway
soj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K6301_21695
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
soj01001
]
K6301_21695
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
soj02022
]
K6301_21695
Enzymes [BR:
soj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
K6301_21695
Protein kinases [BR:
soj01001
]
Histidine kinases
CheA family [OT]
K6301_21695
Two-component system [BR:
soj02022
]
CheA family
Cph1-Rcp1 (light response)
K6301_21695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHY
HATPase_c
GAF
PAS_2
HisKA
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
UPA26571
LinkDB
All DBs
Position
pZ25:complement(1173057..1175225)
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AA seq
722 aa
AA seq
DB search
MHANDVDLDSCAREPIHVPGSVQPHGALLVLDPADLRILQVSANVADIAGTDAAGIAAVL
SSELAAWKASGSLPARLVAPGYPLDIAVHLHDGRVIVELERAASEAMDDPFARLTAFAQQ
MAGNIDLGDALSAAARLIVQLSNFDRALVYRFDADWNGHVVAEAGNGTLPSYLDLRFPAG
DIPAQARDLYRLNPLRLIPDADYTLVPLLALDEEQGRAPVDMTFTQIRSVSPVHLEYMRN
MGTLSSMSISILIDGRLWGLLACHSRQPHIVPVRVRDACNFIAQSLAMQIGAASRAQTAA
IGVELGRLHTKLLASMADAERWDDGLANAPDTLLAITRASGAAILSQNGFSRVGDAPDEE
AVRRLTQWLSENGIASDVYATDCLAAAGFYDRTVTETACGILACRISESDDNWLVWFRPE
VIRTVTWGGDPHKVVRESGRIHPRKSFEAWRESVRDRSAPWHEAEIGAAHDLRASIVEIV
LKKAEQLARLAADLQKSNKELEAFSYSISHDLRAPFRHIVGFSQLLTEREKNLDERSRHY
LKMISDSALAAGELVDDLLTFSHLGRATLATGKVDMNKLVEEVRLGLAEDIKDRAIEWRV
GDLPMTRGDGALLRQVWHNMIENAVKYTRPRAPARIDISGETVDGGLLYRVQDNGVGFDM
AYKAKLFGVFQRLQRSEDFEGTGIGLALVKRIVERHGGSVDATGTVDGGACFTFFLPVLP
EE
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcaaacgatgttgacctcgatagctgcgcgcgcgaacccatccacgttcccgga
tcggtccagccgcacggcgcgctgctcgtgctcgatcccgccgatctccgcattctgcag
gtttccgcgaatgtcgccgacatcgccggtacggatgcggccggcattgccgcggtgctt
tcgtccgagcttgccgcttggaaagcgtcgggatctctcccggcgcgcctcgttgcgccc
ggctatccgctcgatatcgccgtgcatcttcatgatggccgcgtcatcgtggagctggag
cgggccgcatcggaagcgatggacgatccgttcgcgcggctgaccgcattcgcgcagcag
atggccggcaacatcgacctgggcgatgcgctttcggccgcagcccggctgatcgtccag
ctctcgaacttcgaccgtgcgctcgtctaccggttcgatgcggactggaacggccacgtc
gttgcggaagccggcaacggcacgctgccgtcctatctggatctgcgcttcccggcgggc
gacatccccgcccaggcgcgcgacctctatcgtctcaatcccttgcgcctgatcccggac
gccgactatacgctggtgcccttgctcgccctggacgaggagcagggccgcgcgccggtc
gacatgacgttcacgcagattcgcagcgtgtcgcccgtccacctcgaatacatgcgcaac
atgggcacgctgtcgtccatgtccatatcgatcctgatcgacggccggttatggggcctg
ctcgcctgccatagccgccagccgcatatcgttcccgtccgggtgcgtgacgcctgcaat
ttcatcgctcaaagccttgcgatgcagattggtgctgcctcgcgtgcgcaaacggcggcc
atcggcgtcgagcttgggcggctgcatacgaagctcctggcatccatggccgatgcagag
cgctgggacgacgggctggcgaatgcgcccgacactctgctggccatcacacgcgcgtcc
ggtgcggcgatcctctcgcagaacggtttctcgcgggtgggagatgcgccggacgaggag
gcggtgcgccggctgacgcaatggctgtccgaaaacggcatcgcatccgatgtctatgcg
acggactgcctggctgccgccggtttctacgataggaccgtgacggagaccgcctgcggc
attctggcgtgccgcatctccgaaagcgatgacaattggctcgtctggtttcggccggag
gtcatccgaaccgtcacctggggtggggatccgcacaaggtggtgcgcgaaagcggccgg
atccatccgcgcaagtctttcgaggcatggcgggaaagcgtacgcgacaggagtgcgccc
tggcatgaggcggagatcggcgcggcacatgatcttcgtgcctccattgtcgagatcgtc
ctgaagaaggccgagcaattggcgcggcttgcggccgacctgcagaaatccaacaaggag
ctggaggcgttctcctattcgatctcccatgatcttcgcgcgccgttccggcacatcgtc
ggtttctcacagctcctgaccgagcgcgagaaaaatctcgacgagcgttcgcgccattat
ctcaagatgatatcggactcggcgctggctgccggcgaactggtcgatgacctcctgacg
ttctctcatctcggacgggcgacgctggcgaccggcaaggtcgatatgaacaaactcgtc
gaggaagtgcggctgggcctggccgaagacatcaaggaccgcgctatcgaatggcgggtc
ggggatctgccgatgacacggggcgacggcgcattgttgcgtcaggtgtggcacaacatg
atcgaaaacgccgtgaagtacacccgaccgcgcgcgcccgcgcgcatcgacatatcgggc
gagaccgttgatggcggccttttgtaccgggtgcaggacaatggcgtcggcttcgacatg
gcctacaaggcaaagctcttcggtgtattccagcgcctccagcgcagcgaggatttcgag
ggaaccggtatcggtcttgcacttgtcaaacgcatcgtggaaaggcatggcggcagcgtt
gatgccacgggtacggtcgatggcggcgcctgcttcacttttttcctacccgttctacct
gaggagtaa
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