KEGG   Shinella oryzae: K6301_21750
Entry
K6301_21750       CDS       T08112                                 
Name
(GenBank) ABC transporter permease
  KO
K02054  putative spermidine/putrescine transport system permease protein
Organism
soj  Shinella oryzae
Pathway
soj02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:soj00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    K6301_21750
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:soj02000]
    K6301_21750
Transporters [BR:soj02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Putative spermidine/putrescine transporter
    K6301_21750
SSDB
Motif
Pfam: BPD_transp_1
Other DBs
NCBI-ProteinID: UPA26582
LinkDB
Position
pZ25:complement(1185282..1186187)
AA seq 301 aa
MTMAATSHDTPVETAERPTRKQPDRTFWLLAPGALWMLLFLVAPILMMVYVSFWTQTTFK
IEPTLTLKSWVTFFTSDTYLGALWTTVRIWLIVLVSTLLVGYPAALFVGLFVKNKTLSTA
LLVLCVIPFWTSFLIRVLAWRPMLGKEGAINMILMKIGVITQPIEVLLFSELSVIIGMTQ
IYCVFMVGPIAFMLGRIDPSVIEAAQDLGAGFWRIFRTIILPLSMPGVVVGAIFVSVMVL
GEFATSAALSGRKVNLLGNIIVTQVGSLKWAFAAVAGVVLTILMGAVVAALLRVVDLRKE
L
NT seq 906 nt   +upstreamnt  +downstreamnt
atgacgatggccgccacaagccatgacacgcccgtcgaaacggcggagcgtccgacccgc
aaacaacccgatcgcaccttctggctgctggcgcctggtgcgctgtggatgttgctcttc
ctggtcgcgcccatcctgatgatggtctatgtttccttctggacccagaccacgttcaag
atcgagccgacgctgacgctgaagagctgggtcaccttcttcacgtcggatacctatctc
ggcgcgttgtggaccacggtgcgcatctggctcatcgtgctcgtttccacgttgctcgtc
ggctatccggcggcactcttcgtcgggctgttcgtcaagaacaagacgctgtcgaccgca
ctgctcgtgctctgcgtcattccgttctggacctccttcctcatccgcgtgctggcctgg
cggcctatgctcggcaaggaaggcgcgatcaacatgatcctcatgaagatcggcgtgatc
acccagccgatcgaggtgctgctgttctccgaactctccgtcatcatcggcatgacgcag
atctactgcgtcttcatggtcggtcccatcgccttcatgctgggccgcatcgatccctcg
gtcatcgaggccgcgcaggatctcggcgccggcttctggcgcatcttccgcaccatcatc
ctgccgctctccatgccgggcgtggtggtgggcgcgatcttcgtctccgtcatggtgctc
ggcgagttcgcgacatccgccgcgctgtccggccgcaaggtgaacctgctcggcaacatc
atcgtcacccaggtcgggtcgctgaaatgggccttcgccgccgtcgccggcgtggtgctg
acgatcctgatgggcgccgtcgtcgccgccctgctgcgcgtcgtcgatctcaggaaggag
ctctga

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