Shinella oryzae: K6301_21945
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Entry
K6301_21945 CDS
T08112
Name
(GenBank) GntR family transcriptional regulator
KO
K24967
GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
Organism
soj
Shinella oryzae
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
soj03000
]
K6301_21945
Transcription factors [BR:
soj03000
]
Prokaryotic type
Helix-turn-helix
GntR family
K6301_21945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_DeoR
HTH_Crp_2
HTH_11
HTH_41
RP-C
HTH_36
LexA_DNA_bind
PaaX
Motif
Other DBs
NCBI-ProteinID:
UPA26621
LinkDB
All DBs
Position
pZ25:1232858..1233604
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AA seq
248 aa
AA seq
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MTDRPILDFLAHELAAASREPLYRQLEAALKQAIASAQIKRGGVIPSERVLSQELGLSRV
TVRKAIEGLVSDGVLDRRHGAKTVVSSRLEKSLATMTSFSEDMRSRGLEPGCTWISREIS
RPSPAEMMALGISGSEKVVRLRRLRTADGQPIAIEMATLPARFVPEPQAIGDSLYEYLEA
AGALPVRALQRMQAKPGSDEERRLLAAPDDASLLIMERRCFLADGQIVEFTQTKYRGDVY
DFVIELMR
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccgaccgatcctggacttcctcgcacacgagcttgcggctgccagccgtgaa
ccgctctatcgacagctggaagccgccctcaagcaggcgattgcatccgcacagatcaag
cgcggtggcgtcattccgagcgagcgcgtgctgagccaggaactgggcctgtcgcgcgtc
accgttcggaaggccatcgaagggctcgtatcggacggcgtgctcgaccggcgccatggt
gcgaaaaccgtcgtgtcctcccggctggaaaaatcgctcgcgacaatgaccagtttctcc
gaggatatgcgctcacgcggtctcgaaccgggatgcacatggatttcacgcgaaatttca
agaccttctcccgctgaaatgatggcgttgggcatttccggaagcgagaaggtggtgcgg
ctgcgccgcctgcggacagccgacggacagccgatcgccatcgagatggcgaccctgccc
gcgcgcttcgtgcccgagccgcaggccatcggcgactcactctacgaatatctggaggcc
gccggcgccctgcccgtgcgcgcactgcaacgcatgcaggcaaagcccggcagcgacgaa
gagcggcgactgctcgccgcgcctgacgacgcatccctcctcatcatggagcgccgctgc
ttcctggcggacggccagatcgtggaattcacgcagaccaagtatcgtggcgacgtctac
gatttcgtgatcgaattgatgcgataa
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integrated database retrieval system
