Shinella oryzae: K6301_22155
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Entry
K6301_22155 CDS
T08112
Name
(GenBank) sugar ABC transporter ATP-binding protein
KO
K10562
rhamnose transport system ATP-binding protein [EC:7.5.2.-]
Organism
soj
Shinella oryzae
Pathway
soj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K6301_22155
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_22155
Transporters [BR:
soj02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
K6301_22155
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
RsgA_GTPase
AAA_22
AAA_16
TsaE
AAA_23
MukB
MMR_HSR1
AAA_30
AAA_15
AAA_25
DUF815
G-alpha
Motif
Other DBs
NCBI-ProteinID:
UPA26659
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All DBs
Position
pZ25:complement(1278490..1280004)
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AA seq
504 aa
AA seq
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MTIPNEPKVELSGISKSFPGVRALHKVALRLYPGEVTALIGENGAGKSTLVKTMTGIYQP
DEGEIRVSGKPVVLSSPHAAFQAGITAIHQETVLFDELSVAENIFLGHAPRGAFGLIDWR
GMNARARTLLTEIGAGHIASDTKLKDLSIANKHLVAVARALSVNAEVVIMDEPTAALSYK
EIQDLFELVELLKRQGKAILFISHKFDEIYRIADRYTVFRDGEMVGEGLLQDTSQQEIVR
MMVGRSVDQVFPKKEVTPGDEVLKVVGYCHPTEFADIGFSLRAGEILGFYGLVGAGRSEV
MQSLFGITKPSKGAVRIDGEVAVIRSPAQAVDRGIVYVPEDRGKQGAVTGLPIFQNVTLA
SLRKTSRHGFLRLAEEFKLAREYTERLDLRAAALDQNVGNLSGGNQQKVVIAKWLATKPR
VIILDEPTKGIDIGSKAAVHEFMSELASQGLAVIMVSSELPEIMGMSDRIVVMREGRIVG
EFENDATLEPEMLVRAAAGIGEAA
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgactatcccaaatgagccgaaggtcgagctgtcggggatctcgaaatcctttcccggg
gtgcgcgcgctgcacaaggtggcgctgcgcctctatccgggagaggtcaccgcgctgatc
ggcgagaacggtgccggcaagtcgacgctggtcaagaccatgacgggcatctaccagccg
gacgagggtgagatccgggtttccggcaagcccgtcgtgctgtcgtcgccgcatgccgcc
ttccaggccggaatcaccgcgatacaccaggaaacggttctcttcgacgagctgtcggtg
gcggaaaacatcttcctcggccatgcgccccgcggcgcgttcggcctgatcgactggcgg
ggaatgaatgcgcgcgccaggacgctgcttacggaaatcggcgccggccatatcgcgtcc
gacacgaagctgaaggatttgtccatcgccaacaaacatctggtggcggtggcgcgcgcg
ctttcggtcaatgccgaggtcgtcatcatggacgagccgacggcagccctgtcctacaag
gaaatccaggacctcttcgaactggtcgagctcttgaaacggcagggcaaggcgatcctg
ttcatctcccacaagttcgacgagatctaccgtatcgccgaccgctacacggtcttccgc
gatggcgagatggtgggcgaggggctgttgcaggacacgtcgcagcaggagatcgtccgc
atgatggtcggccgctcggtcgatcaggtgtttccgaagaaagaggtgacgcccggcgac
gaggtgctcaaggtcgtcggttactgccatccgaccgagttcgccgatatcggcttttcg
cttcgggctggagaaatcctcggcttctacggccttgtcggcgcgggccggagcgaagtc
atgcagtcgctgttcggcatcacgaaaccgtccaagggcgcggtgcgcatcgatggcgag
gtggccgtcatccgctcgcccgcccaggctgtcgacaggggcatcgtctatgttccggaa
gatcgcggcaagcagggcgccgtcaccggcctgccgatcttccagaacgtcacgctcgct
tcgctcagaaagacgtcgcggcacggtttcctgcggctggcggaagagttcaagctggcg
cgcgaatataccgagcggctggacctgcgtgctgccgcactggaccagaatgtcggcaac
ctctctggcggcaaccagcagaaagtggtgatcgccaagtggctggcgacgaagccgcgc
gtcatcatcctcgacgagccgaccaagggcatcgatatcggctcgaaggcggcggtccac
gagttcatgtcggagctcgcctcgcaggggctcgccgtgatcatggtctcctccgaactc
cccgagatcatggggatgagcgaccgcatcgtggtcatgcgcgagggccgcatcgtcggt
gaattcgaaaacgacgccaccctggaaccggagatgctggtcagggcggccgcaggcatc
ggggaggccgcatga
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