Shinella oryzae: K6301_22160
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Entry
K6301_22160 CDS
T08112
Symbol
rhaS
Name
(GenBank) rhamnose ABC transporter substrate-binding protein
KO
K10559
rhamnose transport system substrate-binding protein
Organism
soj
Shinella oryzae
Pathway
soj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K6301_22160 (rhaS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_22160 (rhaS)
Transporters [BR:
soj02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
K6301_22160 (rhaS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
UPA26660
LinkDB
All DBs
Position
pZ25:complement(1280127..1281116)
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AA seq
329 aa
AA seq
DB search
MKFLHKLAISTAIAAALMAGPASAAERIALVVKSLGNGFFDAAAKGAEEAAKEIGDIEVI
YTGPTSATAEGQIEIINSLIAQQVDAIAISANDPDALVPVLKKAMDRGIKVISWDSGVAK
DGRLLHLNPSETKLIGETIIKLAADHLPEGGEVAILSASSTATNQNAWIEAAKEVLPTKF
PKIKLAAVVYGDDDSVKSTNEAKGLISSYPDLKAIIAPTTVGVVAAAQVVTDQKLIGKIN
VTGLALPSEFKKFIDNGASEGVALWNPIDLGYSAVYLSDQLVKGKAAEPGATFSIGKVGS
ITLDDTNAAAMAAPYQFDKSNIEKFSKIY
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttctgcacaagcttgcaatttccacggccatcgccgccgctctgatggcgggg
cccgcgtccgctgccgagcgcatcgcgctcgtcgtcaagtcgctcggcaacggcttcttt
gatgccgccgccaagggagcggaggaggccgccaaggaaatcggcgacatcgaggtcatc
tataccggccccacctcggccacggccgaaggccagatcgaaatcatcaattcgctgatc
gcccagcaggtcgacgcgatcgccatctcggccaacgatcccgatgcgctcgttccggtc
ctcaaaaaggcgatggatcgcggcatcaaggtcatctcctgggattccggcgtcgccaag
gatggccgcctgctgcatctcaatccgtccgagacgaagctgatcggcgagaccatcatc
aagcttgccgccgatcacctgcccgaaggcggcgaagtggcgatcctgtcggcgtcgtcc
accgcgaccaaccagaacgcctggatcgaggccgccaaggaagtgctgccgaccaagttc
ccgaagatcaagctcgccgccgtggtctatggcgacgatgactccgtgaaatccacaaac
gaagccaagggcctgatctcgtcctatccggatctcaaggccatcatcgcgccgacgacg
gtcggcgtcgtggcggccgcacaggtcgtcaccgaccagaagctgatcggcaagatcaac
gtgaccggcctggcgcttccttccgagttcaagaagttcatcgataacggcgcgtcggaa
ggcgtggcgctgtggaaccccatcgacctcggctattcggccgtttacctctccgaccag
ctcgtcaagggcaaggcggcagagccgggcgcgaccttctccatcggcaaggtcggctcg
atcacgctcgatgacacgaatgccgccgccatggccgcgccctaccagttcgacaagtcg
aatatcgagaaattctcgaagatctactga
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integrated database retrieval system
