Shinella oryzae: K6301_22185
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Entry
K6301_22185 CDS
T08112
Name
(GenBank) ABC transporter substrate-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
soj
Shinella oryzae
Pathway
soj02010
ABC transporters
soj02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K6301_22185
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
K6301_22185
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_22185
Transporters [BR:
soj02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
K6301_22185
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
QRPTase_C
Peripla_BP_3
ThiF
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
UPA26665
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All DBs
Position
pZ25:complement(1286589..1287527)
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AA seq
312 aa
AA seq
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MRLMSKLLVGTAMAAALAMPAAAKDLNKIGISVGLLGNPFFVATIKGIEDRAKEINPNVE
VTSVSADYDLNKQVSQIDSFIAAGVDIIMLNAVDAKAIAPAVKKAQAAGVVVAAFDVSAP
GADVTVMTNNVKAGEEACNYIAEKLGNKGDVVIINGPASSSILERVQGCKEALGKHADIK
ILSDDQNGQGSRDGGLAVMQGLLTRFDKIDAVFAINDPTAIGAELAAKQLNRSEFFFTAV
DGAPDIEKALASGNSMIKASASQDPYVMAGEALKLGVEVLNGKKPAEPVVLLDPQLITAD
NVKDYKGWTAAR
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttatgtccaagttgctcgtcggcaccgccatggctgccgcactcgccatgcct
gccgccgccaaggacctcaacaagatcggtatctcggtcggcctgctcggcaacccgttc
ttcgtcgccacgatcaagggcatcgaggaccgcgccaaggaaatcaacccgaatgtcgaa
gtcacctcggtttcggccgactatgacctcaacaagcaggtttcgcagatcgacagcttc
atcgcggccggcgtcgacatcatcatgctgaacgccgtcgatgcgaaggcgatcgcgccc
gccgtcaagaaggcccaggctgccggcgtcgtcgtcgcggcgttcgacgtttccgctccc
ggcgccgacgtcaccgtcatgaccaacaacgtcaaggccggcgaagaggcctgcaactac
atcgccgagaagcttggcaacaagggcgacgttgtcatcatcaacggtccggcctcctcg
tcgatcctcgagcgcgtgcagggctgcaaggaagcgctcggcaagcatgccgatatcaag
atcctctccgacgaccagaacggccagggctcgcgcgatggcggccttgccgtgatgcag
ggcctgctcacccgcttcgacaagatcgatgccgtcttcgcgatcaacgacccgaccgcg
atcggcgcggaacttgccgccaagcagctgaaccgcagcgagttcttcttcactgcggtc
gatggcgcgccggatatcgagaaggcgcttgccagcggcaattcgatgatcaaggcatcc
gcctcgcaggatccctatgtcatggccggtgaggcgctgaagctcggggtcgaggttctg
aacggcaagaagccggccgagcccgtcgtgctgctcgatccgcagctcatcacggccgac
aacgtcaaggattacaagggctggaccgcagcccgctaa
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