Shinella oryzae: K6301_22430
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Entry
K6301_22430 CDS
T08112
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K18901
membrane fusion protein, multidrug efflux system
Organism
soj
Shinella oryzae
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_22430
01504 Antimicrobial resistance genes [BR:
soj01504
]
K6301_22430
Transporters [BR:
soj02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
K6301_22430
Antimicrobial resistance genes [BR:
soj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
K6301_22430
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Biotin_lipoyl_2
HlyD_D23
HlyD_3
Biotin_lipoyl
OEP
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
UPA26712
LinkDB
All DBs
Position
pZ25:complement(1347573..1348763)
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AA seq
396 aa
AA seq
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MISKRKRWALTGAGLGLVVSASAAALIFQLPATAAKAEATTAAEVPAVPVTVTVVENRDV
VTWQEFSGRLEAIDRVQVRSRVSGAIQSVHFREGALVKAGDLLFTIDPQPFQTAVTQAKG
QFASAEARVKLAKTQLDRGERLAQSNSISQSDIDQRLNAVAEAEAALTTARATLDAAELE
LSYTNVRAPVAGRVGKVEITTGNLVAGGSASPALTTLVSVDPIYASFNVSEETVSAALAA
LPASEGALPPIEQIPVEVGTLADEGTPIHGKLQLIGNEVDAASGTIAVRAVFDNPGNRLI
PGQFVRIRMGEPKAESKILVSEKAVGTDQDKKFVFVVDKENKVAYRPVVLGSLSGNERIV
ESGLSNGDKVVVNGLQRVRPGVVVDPQVQENVAAVK
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgatatcgaagcgcaaacgctgggccctcacgggcgccggcctgggattggttgtctct
gcttctgccgcagccctgatcttccaacttcccgccaccgccgccaaggccgaggcgacc
accgccgcggaggttcccgcggtgccggtcaccgtgaccgtggtcgagaaccgcgacgtg
gtgacatggcaggaattctccggccgcctggaggccatcgatcgcgtgcaggttcgctcg
cgcgtttcaggcgccatccagtcggttcacttccgcgagggtgcgctggtgaaggccggc
gacctgctcttcaccatcgatccacaacccttccagaccgcggtgacgcaggccaagggc
cagttcgcgtccgccgaggcccgggtgaagcttgccaagacgcagcttgatcgcggtgaa
cgcctcgcccagagcaacagcatctcgcaaagcgacatcgaccagcgcctgaacgcggtc
gcagaggccgaagcggcgctgaccaccgcgcgcgccacgctcgatgccgccgagctggaa
ctgagctacacgaatgtgcgcgccccggtcgccggccgcgtcggcaaggtggagatcacc
acgggcaacctggtggcgggcggctcggcctccccggcgctgacgacgctcgtctccgtc
gatccgatctatgccagcttcaatgtcagcgaggaaacggtctcggcggcgctcgccgct
ctgcctgcctccgaaggcgctttgccgccgatcgagcagatcccggtagaggtcggcacg
ctcgccgatgagggcacgcccattcacggcaagctccagctcatcggcaacgaggtggac
gcggccagcggcacgatcgccgtgcgcgccgtcttcgacaatccgggcaaccggctgatc
cccggccagttcgtgcgcatccgcatgggcgagccgaaggccgagagcaagatcctcgtc
agcgagaaggccgtcggaaccgaccaggacaagaagttcgtcttcgtcgtcgacaaggaa
aacaaggtcgcctaccggccggtcgtgctcggcagcctgtcgggcaacgagcgtatcgtc
gaaagcggcctttccaatggcgacaaggtggtcgtcaacggcttgcagcgcgtgcgcccc
ggtgtcgtggtcgacccgcaggtgcaagaaaacgtcgccgccgtgaagtaa
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