Shinella oryzae: K6301_22550
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Entry
K6301_22550 CDS
T08112
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
soj
Shinella oryzae
Pathway
soj02020
Two-component system
soj02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K6301_22550
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
K6301_22550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
soj02035
]
K6301_22550
Bacterial motility proteins [BR:
soj02035
]
Flagellar system
Chemotaxis proteins
MCPs
K6301_22550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
Laminin_II
Fib_alpha
Motif
Other DBs
NCBI-ProteinID:
UPA28026
LinkDB
All DBs
Position
pZ25:complement(1373247..1375079)
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AA seq
610 aa
AA seq
DB search
MSLLQNLRIRTKVLSLVLPACLIGIGGTLYVSGKFKSADTEYSDFVTNDGNAEIDMAIAS
QRLVSIVYDAYQVFLYDAGTEGMKRAEGDYAASKTRLNELIDNAMTLMPADREALASLQA
QSNSVIDITDKAVAAGSADRNDEAKALLVQADEKAAETIKAMRAWINNTSDRLKEKAAVL
SEKTNNTILYTLLALAAVFSSLLLLAVIVTKREISNPIERLRLRMMSLASGQVNEAVPGV
DRRDELGSMASAVSVFRDNAIEKDRLEKQSDADRALSEQERLEREKQKAADAANTKFAVD
SLRDGLEALADGNVSHRILTPFTGTLDELRSNFNSSVEKLHSVLRSVGQNAEGIDAGANE
IRAAADDLSRRTEQQAASVEETAAALEQITTTVKDSAKRADDAGRLVSKARTGAEQSGAL
MQNAVEAMMAIEKSAGEMGNIISVIDEIAFQTNLLALNAGVEAARAGEAGKGFAVVAQEV
RELAQRSANAAKEIKALIAASGSQVQTGVELVKQTGVSLETIVAEVREISLHVNAIVESS
REQATGLQEINTAVNVMDQGTQQNAAMVEQSTAASHGLAREAAALNQLLAQFNLGGSKGS
EHGLRAMRAA
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcttgcaaaacctgcggatcagaacaaaggtcctgtccctcgtccttcccgcc
tgtcttatcggcatcggcggaacgctctatgtctcgggaaaattcaagtctgcggacacc
gagtattcggatttcgtcaccaatgacgggaacgccgagatagacatggccattgccagc
cagcgtctcgtttcgatcgtttacgacgcctatcaggtgtttctctatgacgccggaacc
gaaggaatgaaacgagcggagggcgactacgcggccagcaagacacggctcaacgagctg
atcgataacgcgatgacgttgatgccggcagaccgcgaggcgctggcgtctctccaggcg
caatccaacagcgtcatcgacatcacggataaagccgtcgctgcggggtccgccgaccgc
aacgacgaagccaaagcccttctcgtccaggccgatgaaaaggctgccgagacgatcaag
gcgatgcgcgcatggatcaacaatacgagcgacaggctcaaggagaaggctgcagtcctt
tctgagaaaaccaacaacacgatcctgtatactctgttggcattggccgctgttttttcg
tccctgctgcttctcgctgtgatcgtcaccaagcgcgagatttccaatccgatcgagcgg
cttcgcctcagaatgatgtcgcttgcctccgggcaggtgaatgaggctgtgcccggcgtc
gaccgccgggacgagctcggaagcatggcttcggccgtctccgtctttcgcgataacgcc
atcgaaaaggatcgcctggaaaagcagagcgacgccgaccgggcgctttcggaacaggag
agactggagcgggagaaacagaaggccgccgacgccgccaacaccaagtttgccgtcgat
tcgctgcgcgacgggttggaagctctcgccgatggcaacgtctcccaccgcatcctgacg
cccttcaccggcacgctcgacgaactgcgctcgaacttcaacagctccgtggagaagctt
cactccgtgcttcgctcggtcgggcagaatgcggaagggatcgatgccggtgcgaatgag
atccgcgcggctgcagacgatctgtcgagacgcacggaacaacaggcagcctctgtcgag
gaaacggcagcagccctggagcagatcaccacgacggtcaaggattcggccaagcgtgca
gatgatgcaggtcgcctcgtatcgaaggcacgaacaggcgccgaacaatccggtgccttg
atgcagaatgctgtcgaagcgatgatggccattgagaaatcagcgggtgagatgggtaat
attatctccgtcatcgatgaaatcgcgttccagaccaatctcctggcgttgaatgcgggc
gtggaagcggcgcgcgccggcgaggcggggaaaggctttgcggtggtcgcgcaagaggtt
cgggaacttgcccaacgctcggcgaacgcggccaaggaaatcaaggccttgatcgcggcg
tccggctctcaggttcaaaccggcgtcgagcttgtcaagcagaccggcgtttcgctcgag
acgatcgtggcggaagtccgggagattagcctgcacgtgaacgccatcgtggaatcctcc
cgtgagcaggcgaccggccttcaggagatcaacaccgccgttaacgtgatggaccaaggt
acgcaacagaacgcggcgatggtcgagcagtcgacggctgccagccatggccttgcccgg
gaagccgctgcgcttaaccagctcctggcgcaattcaatcttgggggatcgaaaggttcg
gagcacggtcttcgggcgatgcgagccgcatag
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