Shinella oryzae: K6301_22695
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Entry
K6301_22695 CDS
T08112
Name
(GenBank) HAMP domain-containing protein
KO
K10125
two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:
2.7.13.3
]
Organism
soj
Shinella oryzae
Pathway
soj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K6301_22695
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
soj01001
]
K6301_22695
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
soj02022
]
K6301_22695
Enzymes [BR:
soj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
K6301_22695
Protein kinases [BR:
soj01001
]
Histidine kinases
NtrC family
K6301_22695
Two-component system [BR:
soj02022
]
NtrC family
DctB-DctD (C4-dicarboxylate transport)
K6301_22695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HAMP
HisKA
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
UPA26752
LinkDB
All DBs
Position
pZ25:1403304..1405205
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AA seq
633 aa
AA seq
DB search
MTYDGSRRNGPRRWRFGIGARLGAAFVAIVGLAVGASLVGWLSYRELSGELSRIAEVQMP
QLAFASRLSKAGADIGSVTTALTGAETRAEYNETRRVYAERLAALQALLEDNEAEPSVQK
LLPLAASINGNLARIDLAAGKRFTLAEAMRADVDELRWVQADLIEEADPLVDDIRFNIEA
ETRNGRSAAALGEQRRSEALLTVVSQANLATGLIARLVSSATAEEVQEANAFLGDSADEL
AARLATLEGWPDSLTVRQLARRILQQSDPATGTPNRKRSEMREAERLGELAKENGRLVAA
LGQRIEAEVVAIEASAGAAAQRAAAAIDLGRKLLAAIAVLAVALAVVIGVFYVHRSLLVR
IDQLAHVATAISAGNPAVPIPPGGNDELADLARALTLFRQTRDELVQSAKLAALGQMAAG
IGHELNQPLAAIRAHIHSGSTLISRGNSEQALNNLEKIRGLTARMAGQISHIRRFARRPD
AKLQPVDLAAVVHEALSLLDHRFEEEGATLALVLPPDLPQVMAEPVRLEQVVVNLVANAL
DAVAERAERVVTVTAVGSGEGASLIVGDTGAGIAAGKRDAVFDPFFTTKPVGAGLGLGLS
ISYNIIKDFGADIAVLETGPCGTSFIVSLKGAA
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgacctatgatggatcacgacggaacgggccgaggcgctggcgctttggcatcggcgcg
cgcctcggtgcggccttcgtcgcgatcgtcggtcttgccgtcggcgccagtcttgtcggc
tggctttcctatcgcgagttgtcgggcgagctttcgcgcattgccgaagtgcagatgccg
cagctggctttcgcctcgcggctctccaaggcgggagcggatatcggctcggttacgacg
gcgctgaccggcgcggagacacgggcggaatataacgagacccgccgcgtctatgccgag
cggctggccgccttgcaggcattgctggaggacaacgaggccgaaccttccgtgcagaag
cttctaccgctggccgcctcgatcaatggcaatctcgcccggatcgacctggcggccggc
aagcgcttcacgctggccgaggcgatgcgcgcggatgtcgacgaactgcgctgggtgcag
gccgacctgatcgaggaggctgatccgctggttgacgacatccgcttcaacatcgaggcg
gaaacacgcaatggccgcagcgcggccgcgctcggcgagcagcggcgcagcgaagcgctg
ctgaccgtggtgtcgcaggccaatcttgcaaccgggctgatcgcccggctcgtcagcagc
gcgacggcggaggaggtgcaggaggccaacgcttttctcggcgacagcgcggacgagctt
gctgcgcgcctggcgacgctagagggctggccggacagtctgacggtgcgccagcttgcc
cggcgcatcctgcagcaatctgaccccgcgacgggtacacccaaccgcaagcgttccgaa
atgcgcgaggcggagcggctcggtgaactggcgaaggagaacggccgtctcgtcgcggcg
ctcggtcagcgcatcgaggcggaagtggtggccatcgaggcgagcgccggtgcggcggcg
caaagggcggcggcggccatcgatctcgggcgtaagctgcttgcggccatcgccgtgctg
gccgtcgcgctcgccgtcgtcatcggcgtcttttatgtgcatcgcagcctgcttgtccgc
atcgaccagctcgcccatgtcgcgacggcgatcagcgcgggcaatcccgctgtacccatc
ccgccgggcggcaacgacgaactggcggaccttgcccgcgctctcaccctctttcgccag
acgcgcgacgagctggttcagtcggcaaagctcgcggcgctcggccaaatggcggccggc
atcggccacgagctcaaccaaccgctggcggcaatccgcgcgcatatccacagcggctcc
acgctgatctcgcgtggcaacagcgagcaggcgctgaacaacctggagaagatccgcggg
cttacggcgcgcatggccgggcagatcagccatatccgccgcttcgcgcgccggccggat
gcgaaactgcagcccgttgatcttgcggccgtcgtgcacgaggcgttgagcctgctcgac
catcgcttcgaggaggagggcgcgacgctcgcactcgtgctgccgcccgatctgccgcag
gtcatggccgagccggtgcggctcgaacaggtcgtggtgaaccttgtcgccaatgccctc
gatgccgtggcggagcgggccgaaagggtggtgacggtgacggcggtggggagcggcgag
ggggcgagcctgatcgtcggcgataccggtgcgggcattgctgctgggaaacgcgatgcg
gtcttcgatcccttcttcaccaccaagccggtgggtgcgggtcttgggctcggcctttcc
atttcctataacatcatcaaggatttcggcgccgatatcgccgtgctggagaccggaccc
tgcggcacgtccttcatcgtgtccctgaaaggagcggcatga
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