Shinella oryzae: K6301_23165
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Entry
K6301_23165 CDS
T08112
Name
(GenBank) ABC transporter permease
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
soj
Shinella oryzae
Pathway
soj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K6301_23165
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_23165
Transporters [BR:
soj02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
K6301_23165
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Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
UPA26829
LinkDB
All DBs
Position
pZ25:1503658..1504548
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AA seq
296 aa
AA seq
DB search
MAAITETSSETLVTPRASRRDLWLLAPGALWMLLFLVAPILMMVYVSFWTQTTFKIEPTL
TLKSWVTFFTSDTYLGALWTTVRIWLIVLVSTLLVGYPAALFVGLFVKNKTLSTALLVLC
VIPFWTSFLIRVLAWRPMLGKEGAINMILMKIGVITQPIEVLLFSELSVIIGMTQIYCVF
MVGPIAFMLGRIDPSVIEAAQDLGAGFWRIFRTIILPLSMPGVVVGAIFVSVMVLGEFAT
SAALSGRKVNLLGNIIVTQVGSLKWAFAAVAGVVLTILMGAVVAALLRVVDLRKEL
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggccgcaatcaccgaaacttcgagcgaaaccttggtcaccccgcgcgcctcgcgccgc
gatctctggctgctggcgcctggtgcgctgtggatgttgctcttcctggtcgcgcccatc
ctgatgatggtctatgtttccttctggacccagaccacgttcaagatcgagccgacgctg
acgctgaagagctgggtcaccttcttcacgtcggatacctatctcggcgcgttgtggacc
acggtgcgcatctggctcatcgtgctcgtttccacgttgctcgtcggctatccggcggca
ctcttcgtcgggctgttcgtcaagaacaagacgctgtcgaccgcactgctcgtgctctgc
gtcattccgttctggacctccttcctcatccgcgtgctggcctggcggcctatgctcggc
aaggaaggcgcgatcaacatgatcctcatgaagatcggcgtgatcacccagccgatcgag
gtgctgctgttctccgaactctccgtcatcatcggcatgacgcagatctactgcgtcttc
atggtcggtcccatcgccttcatgctgggccgcatcgatccctcggtcatcgaggccgcg
caggatctcggcgccggcttctggcgcatcttccgcaccatcatcctgccgctctccatg
ccgggcgtggtggtgggcgcgatcttcgtctccgtcatggtgctcggcgagttcgcgaca
tccgccgcgctgtccggccgcaaggtgaacctgctcggcaacatcatcgtcacccaggtc
gggtcgctgaaatgggccttcgccgccgtcgccggcgtggtgctgacgatcctgatgggc
gccgtcgtcgccgccctgctgcgcgtcgtcgatctcaggaaggagctctga
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