Shinella oryzae: K6301_23295
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Entry
K6301_23295 CDS
T08112
Name
(GenBank) xanthine dehydrogenase family protein subunit M
KO
K11178
xanthine dehydrogenase YagS FAD-binding subunit [EC:
1.17.1.4
]
Organism
soj
Shinella oryzae
Pathway
soj00230
Purine metabolism
soj01100
Metabolic pathways
soj01120
Microbial metabolism in diverse environments
soj01232
Nucleotide metabolism
Module
soj_M00958
Adenine ribonucleotide degradation, AMP => Urate
soj_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
K6301_23295
Enzymes [BR:
soj01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
K6301_23295
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_5
CO_deh_flav_C
DUF4928
Motif
Other DBs
NCBI-ProteinID:
UPA26851
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All DBs
Position
pZ25:complement(1534329..1535315)
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AA seq
328 aa
AA seq
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MRTFEYIRAADRADAVARAGSGARFLGGGTNIVDLLRQNVEQASELVDVSRLDGAIRESD
GGGLLIDASVRNAALAAHPLVRGRYPVLSRALLAGASAQIRNMATVGGNILQRTRCMYFY
DVEGARCNKRQPGTGCDALDGFNRYHAILGASDQCVATHPSDMCVALAMLDALIHLSGPD
GERSIRLTDFHVLPNASPQIETVLKPGELITGVELPPPSDAVTHSEYRKVRDRSSYAFAL
ISVAGGLALTDGRVTEARVALGGVAAKPWRAARAEAALIGVAPTEEAFLAAIREELAGAQ
PLSGNAFKIVLVERTVVALLAALAGAHQ
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaggacgttcgaatatatccgcgcggcggatcgagccgatgctgtcgcgcgcgccgga
agcggcgccaggtttctaggcggtggaaccaacatcgtcgatctgctgcgccagaatgtc
gaacaggcaagcgaactcgtggatgtcagccggctggatggcgccatccgcgaaagcgac
ggtggcgggctgctgatcgacgcgtcggttcgcaacgccgcccttgccgcacacccgctc
gtacgcggccgctatcccgtgctttcacgcgcgctgctcgccggtgcctccgcgcagatc
cgcaacatggcgacggtcgggggcaatatcctccagcgtacgcgctgcatgtatttttac
gatgtcgagggcgcacgctgcaataagcggcagccgggcaccggctgcgacgcacttgat
gggttcaatcgctatcatgcgatcctgggcgcgtcagaccagtgcgttgcaacgcatcct
tccgacatgtgcgtcgcgcttgccatgctagatgccttgatccatctctccggccccgat
ggcgagcgatcgatccggctgacggattttcacgttttgccgaacgcctccccacaaatc
gagaccgtgctgaaacccggagagttgatcaccggggttgaactgccgccgccttcggac
gctgtcacgcattccgaatatcgcaaggtccgcgatcgctccagctacgctttcgcactg
atctccgtcgcaggcggcctggcgctgacggatggacgcgttaccgaagcccgggttgcg
ctcggcggtgtggccgccaagccatggcgggcggcgcgggcggaagcggcgctgatcggc
gttgcgccgaccgaagaggctttcctggccgcaatccgcgaagaattggccggcgcgcag
ccgctgtcgggcaacgctttcaagattgtcctcgtcgaacgaacggtggtcgctctgctg
gccgcgctcgcaggagcacaccaatga
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