KEGG   Shinella oryzae: K6301_23555
Entry
K6301_23555       CDS       T08112                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
soj  Shinella oryzae
Brite
KEGG Orthology (KO) [BR:soj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:soj02044]
    K6301_23555 (tssC)
Secretion system [BR:soj02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   K6301_23555 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: UPA26899
LinkDB
Position
pZ25:complement(1588169..1589656)
AA seq 495 aa
MAQAHGAAQALEPQQEILDPATLLDMAISATKQTQPDRTRALLRTLVQEALTGTVTYDRN
LTITINGAIARIDALLSRQLAEIMHDEKFLKLEGSWRGLHYLVKNTETSANLKIRVLNAG
KREIMKDLAKSVEFDQSHLFRAVYESEFGTPGGEPYGALVGDYQWTNHPEDIQALQGISG
VAAAGFTPFVSAAGAGLFGFDDFRELSRPRDLEKIFTTAEYTKWRSFRESDDSRFVTLVM
PSVLARLPYGSDTQRIEAFDYDENIDSPGRQLDHNDYCWMNASYVMGARLTAAFAKSGWC
TAIRGAENGGKVEDLPVHVFQSDDGDLDLQCPTEIGITDRRDAELAKLGFLPLSHYKNTD
YAVFFGAQTAHKPKKYDRPEATANAAISARLPYLMATSRFAHYLKVIGRDKIGSFMEVDD
CEAWLNRWISNYVNANDGAGEETKARYPLREARVEVKEIPGMPGAYHAIAHMRPWLQLEE
LTTSLRMVARIPQKR
NT seq 1488 nt   +upstreamnt  +downstreamnt
atggcacaggcacacggagcagcgcaggccctagagccgcaacaggaaatccttgatccg
gcaaccttgctggacatggcgatttccgccaccaagcagacccagccggaccgcacccgt
gcgcttctgcgcaccctcgtgcaggaggccctcaccggcaccgtcacctacgaccgcaac
ctcacgatcacgatcaatggggccatcgcacgcatcgacgctctgctgtcacgccaactc
gccgagatcatgcacgacgagaaattcctcaagctcgagggcagctggcgcggcctgcat
tatctcgtcaaaaacaccgagacgagcgccaacttgaagatccgtgtgctgaacgccggc
aagcgcgagatcatgaaggacctcgccaagtcggtggagttcgaccagagccacctcttc
cgtgcggtctacgaaagcgaattcggcacaccgggcggcgagccctacggcgcccttgtc
ggcgattaccagtggaccaaccatccggaagacatccaggcgctgcaaggcatatccggc
gtggcggctgcgggcttcacgccatttgtttccgccgccggagccggcctctttggcttc
gacgatttccgcgagctgtcgcgcccgcgtgatctcgagaagatctttacgaccgccgaa
tacacgaaatggcgctccttccgtgaaagcgacgattcccgcttcgtgacgcttgtcatg
ccgagcgttctcgcccgtctgccctatggttccgatacgcagcgcattgaggccttcgac
tacgacgaaaacatcgattcgcccggccggcagctcgatcacaacgattactgctggatg
aacgcgtcctacgtgatgggcgcccggctgaccgccgctttcgccaaatccggctggtgc
acagctattcgcggcgcggagaacggcggcaaggtcgaggacctgccggtacacgtcttt
cagagcgatgacggggacctggatctgcagtgcccgaccgaaatcggcatcaccgaccgg
cgcgacgccgagcttgccaagctcggtttcctgccgctctcgcactacaagaacaccgac
tacgcggtgttcttcggtgcgcagacggcacataagccgaagaagtacgaccgcccggag
gcgacggccaacgcggcaatttccgcacgcctgccctatctgatggcgacgtcgcgtttt
gcgcactacctcaaggtcatcggtcgcgacaagatcggctcgttcatggaagtcgacgat
tgcgaagcttggctaaatcgctggatctccaactacgtcaacgccaatgacggcgccggc
gaggagaccaaggcgcgctatccgctgcgggaagcacgcgtcgaggtcaaggaaattccc
ggcatgcccggcgcctatcacgccattgcccatatgcggccctggctgcagctcgaagag
ctgacgacgtcgctgcgcatggtggcgcgcataccgcaaaagcgctga

DBGET integrated database retrieval system