KEGG   Shinella oryzae: K6301_24595
Entry
K6301_24595       CDS       T08112                                 
Name
(GenBank) VirB4 family type IV secretion system protein
  KO
K03199  type IV secretion system protein VirB4 [EC:7.4.2.8]
Organism
soj  Shinella oryzae
Pathway
soj03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:soj00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    K6301_24595
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:soj02044]
    K6301_24595
Enzymes [BR:soj01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     K6301_24595
Secretion system [BR:soj02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   K6301_24595
SSDB
Motif
Pfam: CagE_TrbE_VirB P-loop_TraG AAA_22 ATPase_2 FtsK_SpoIIIE AAA_16 TrwB_AAD_bind ABC_tran TraG-D_C NPHP3_N T2SSE AAA_23 cobW RsgA_GTPase
Other DBs
NCBI-ProteinID: UPA27073
LinkDB
Position
pZ25:1821275..1823674
AA seq 799 aa
MKGISALPSAATIRLRELDPETFIPYVRHVDERTIALESRALMMVIALEGVSFETADVHD
LNSLHRDLNTLYRNIADERLALWTHLIRRRDNSYPEGTFNAPFSSSLNRKYRDRIVRADL
FRNDLYLSVVWSPLRDPAERAAKLLSRLVRASRSCVELDEEALKQLRDKVIDITAGLKRF
KPRVLSLYDHEGLAFSRPSEVLHQLVGGRSEPVPLTEGRIASAIYSDRVIIGRETIEIRH
EAESRFAGMLSFKEYPATTRPGMLDDVLKSPFELIMSQSFSFISKVDARTIMGRKQNQML
SSGDKAVSQIDELDDAMDGLESNRFVLGEHHLSLAVFAPSVRELGDHLATARASLTNGGA
VVAREDLGLEAAWWAQLPGNFRFRARSGAITSRNFAALSPFHSYPIGRRDGNEWGPAVAL
LKTASGSPYYFNFHYGDLGNTFICGPSGAGKTVLLNFMLSQLEKHDPYVVFFDKDRGGDL
YVRAAGGAYFPLKNGTPTGCAPLKALELTPENKVFLAHWVGKLVGSSTRELSVTELRDIA
AAIDGLADLPMDRRTIGALRTFLDNTNPEGIAARLRRWERGGPLGWVFDNAIEDIGVGNL
GFSGKMVGYDMTDFLDNEEIRTPLMAYLFHRVEQLIDGRRIIIVIDEFWKALQDEGFRDL
AQNKLKTIRKQNGLMLFATQSPRDAINSSIAHTIIEQCPTQIFLPNARGDHADYVSGFKL
TEREYEIIARELSIESRRFVLKQGHNSVVAELDLDGFDDELAILSGRTGNVELADAIRAQ
VGGDQADWLPIFHERRSVR
NT seq 2400 nt   +upstreamnt  +downstreamnt
atgaaagggatctctgctttgcctagtgccgcaacgatcaggttgagggagctcgatccc
gaaaccttcattccttacgtacgccatgtcgatgaaagaacaattgctctggagtcgcgg
gcgctaatgatggtgatcgcactcgaaggcgtatccttcgagaccgcggatgttcacgat
cttaattcgctacatcgcgacctcaacacactttacaggaacattgcagacgagcggctt
gcactctggacgcacctgatccgccgtcgcgataactcctatccagaagggacattcaac
gcaccgttttcctcgagcctcaacagaaaatatcgtgaccgtatcgttcgtgcggatctc
tttcgaaacgacctctacctgtccgtcgtctggtcgccgctgcgcgacccggcggagagg
gctgcgaaactgttgtcgcgcctggtcagggcgagccggtcgtgcgtagagctcgacgaa
gaggcgctgaagcaacttcgcgacaaggtcatcgatatcacggctggcttgaagcgcttt
aagcctcgcgtcttgtcgctttatgaccatgaggggctcgcgttctcccggccgagcgag
gttctccaccaactcgtcggcggaagatcggaaccagttccccttacagaaggccgcatt
gcctcggcgatctattcggaccgcgtcatcattggccgcgaaacgatcgagattcgacac
gaggccgagagccggtttgccggcatgctgagcttcaaggaatatccagccaccaccaga
cccgggatgctggacgatgtcttaaaaagcccgttcgaactaatcatgtcgcaatccttc
tcctttatctcgaaggtggatgcgcggaccataatgggccgcaagcagaatcaaatgctg
agcagtggcgacaaggcggtatcgcaaatcgacgaactcgacgacgcgatggacggactt
gagtcgaacaggttcgttttgggcgagcatcatttgtcactcgcggtgttcgcgccgtcg
gtgagggagctgggagatcatcttgccacggcccgcgcgagcttgacaaacgggggcgcc
gttgtcgcgcgcgaggaccttggcctcgaagcggcatggtgggcgcaacttcccggcaac
ttccggttccgcgcgaggtccggtgccatcacatcacggaatttcgcagcgctgtcgcca
ttccattcctatccaatcggtcgaagggacgggaacgagtggggcccagccgtcgcgctt
ctgaagaccgcgtccggatcaccttactattttaacttccactatggcgatcttggcaac
acgttcatttgtggcccgtcaggcgctggaaagacggtgttgctcaatttcatgctgtcg
cagcttgagaagcacgatccgtatgtcgttttcttcgacaaggaccgtgggggcgatctc
tatgttcgggctgcgggcggagcctatttccccctcaagaacggaactccgaccggttgc
gctcccctaaaggccctcgagctcacgccggaaaacaaggtgttccttgcgcactgggtc
ggaaagctggtcggatccagtacgcgggaattgtcggtaactgagctgcgcgatattgcc
gccgcgattgatggtctggccgacctgccgatggaccgccgtacgattggcgccctccgg
accttcctcgacaacacgaacccggaaggcatcgccgcgcggctgcgtcggtgggaacgg
ggaggtccgcttggctgggtcttcgacaacgccattgaggatatcggcgtcggaaatctc
ggcttcagcggaaagatggtcggttacgacatgaccgatttcctcgacaacgaggaaatc
cgcacgcccctgatggcctacctcttccaccgcgtggaacaactgatcgacggccgtcgg
atcattatcgttatcgacgaattctggaaggcgctgcaggacgagggattccgggatctc
gctcagaacaagttgaagacgatccgcaagcaaaacggtctcatgctgtttgccacgcaa
agcccacgcgacgcgatcaactcatcgatcgcccacactatcatcgaacaatgcccgacc
cagatttttcttccgaatgctcgtggcgatcacgccgactacgtgagcggcttcaaactg
accgaacgcgaatatgaaattatcgcgcgcgagctctccatcgaaagccgacggttcgtg
ctgaagcaagggcacaacagcgtcgtcgctgagttagatctcgacggcttcgacgacgaa
ctcgcaatactctccggacgaaccggcaatgttgaactcgcggatgcgatccgcgcacaa
gtcggtggcgatcaagcggactggcttcctattttccacgagcgaaggagtgtgcgttga

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