Shinella oryzae: K6301_24695
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Entry
K6301_24695 CDS
T08112
Name
(GenBank) ABC transporter ATP-binding protein
KO
K01995
branched-chain amino acid transport system ATP-binding protein
Organism
soj
Shinella oryzae
Pathway
soj02010
ABC transporters
soj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K6301_24695
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K6301_24695
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_24695
Transporters [BR:
soj02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
K6301_24695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
BCA_ABC_TP_C
AAA_25
AAA_21
AAA_23
SMC_N
RsgA_GTPase
AAA_29
Rad17
DUF3829
AAA_30
AAA_16
AAA
TsaE
SRP54
AAA_15
AAA_13
Motif
Other DBs
NCBI-ProteinID:
UPA27088
LinkDB
All DBs
Position
pZ25:1843189..1843944
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AA seq
251 aa
AA seq
DB search
MSRPLKERLEARGVAVAFGGIRALSGVDLELRRGEVLGLIGPNGAGKTTMVNVLSGFQRP
TSGSISLDGVDVSKLTARKIAQAGVGRSFQAARLFRAMTVEQNLSVAAIGSGLSLKAARE
RALEILEWMDLAKKAEHRCDSLSYGDERRVSIARALALQPSFALLDEPASGMNDAECEAL
MQVIAELPARFGCGVLLIEHNMKVIMGVCQRIHVLDGGQSLAEGSPQDIQKNPAVRRAYL
GEKAADSTLAI
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtccattgaaagaaaggctcgaagcccgcggcgttgccgtggcctttggcggc
atccgggccctgagcggagtcgatctcgaactccgacgcggcgaggtgcttggcctcatc
ggcccgaacggcgccggcaagacgaccatggtcaatgtgctgagtggcttccagcgcccg
accagcggcagcatcagcctcgacggcgtcgacgtctccaagctcaccgctcgcaagatc
gctcaggccggcgtcggccgcagcttccaggcggcgcgtctcttccgggcgatgacggta
gagcagaacctttcggtcgccgcaatcggcagcggactttcgctgaaagccgcccgggag
cgggcgctcgaaatcctcgaatggatggacctcgcgaaaaaggccgaacaccgctgcgac
agcctgtcctatggcgacgagcggcgtgtcagtattgcccgggcgcttgccttgcagccg
tctttcgcgcttctcgacgagccggcctccggcatgaacgacgcggaatgcgaggcgctg
atgcaggtcatcgccgaactgccggcccgcttcggctgcggcgtgctgctgattgaacac
aatatgaaggtgatcatgggcgtctgccagcgcatccatgtgctcgacggcggccagagc
cttgccgagggctcgccccaggacatccagaaaaaccccgccgttcgccgcgcctatctg
ggcgaaaaggcggccgacagcacccttgcgatctag
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