Shinella oryzae: K6301_24745
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Entry
K6301_24745 CDS
T08112
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
soj
Shinella oryzae
Pathway
soj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K6301_24745
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soj02000
]
K6301_24745
Transporters [BR:
soj02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
K6301_24745
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
AAA_29
AAA_16
AAA_23
TOBE
DO-GTPase2
nSTAND_NTPase5
AAA_25
nSTAND3
AAA_15
Motif
Other DBs
NCBI-ProteinID:
UPA27097
LinkDB
All DBs
Position
pZ25:1854776..1855867
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AA seq
363 aa
AA seq
DB search
MIDQQERARVGVSIRQATKSYGPFRALDDVSLDVGQGEFVSILGPSGSGKTTLLGILGGF
VQPSAGSIWLGNRDITFEPPHKREIGIVFQNYALFPHMSVGENITFPLRARRLPKATWPD
RLASALEMVELTGYENRKIHELSGGQRQRVALARAMIFEPGLILMDEPLSALDKQLRENM
QIELKRLHKRLGSTIIYVTHDQREALTMSDRVAIMNRGKLVQVDTPERLHDHPANTFVAS
FIGEATLLPVQRESDSVVRLGQQALKTAHPMPAGSNLHLVVHSEKLVVADGSEPEASNRL
SGTVTDTLYQGESIRVFVKLDDGGEMSFRLPSNHAGRALMKSPGEAITLALHPEDTVIVP
EAG
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgattgatcaacaagaaagagcgcgcgtcggcgtttccatcaggcaggccacgaagtcc
tacgggccctttcgcgcactcgacgacgtaagcctcgatgtcggccagggcgagttcgtc
tccattctcggcccgtccggttccggcaagacgacgctcctcggcatcctgggtggtttc
gtccagccgagtgcaggctccatctggctgggcaatcgcgatattacatttgagccgccg
cacaagcgtgagattggcatcgtcttccagaactacgccctgtttccacatatgagtgtg
ggcgagaacattactttcccgctgcgggcgcgtcgcctgccaaaggcgacatggccggac
aggttggcgtcggcgctcgagatggtcgaattgacgggctacgaaaaccggaagatccac
gagctttcgggaggccagcgtcagcgtgttgcccttgcacgcgccatgatcttcgagccg
ggcctgatcctgatggacgagccgctctcggcgctcgacaagcaactgcgtgaaaacatg
cagatcgaactgaagcgcctgcacaagaggctcggctccaccatcatctatgtcacccac
gaccagcgggaggcactgacgatgagcgaccgagtggcgatcatgaacaggggtaaactg
gtgcaggtcgatacgcccgagcgcctgcacgatcaccccgccaataccttcgtcgccagc
ttcatcggggaggcgaccttgctgcctgttcagcgcgaaagcgacagcgtcgtgcgcctc
ggccagcaggcgctgaagacggcgcatcccatgccggccgggtcgaacctgcatctcgtg
gtccattccgaaaagctcgtcgtggccgacggttcggagccagaagccagcaacaggctc
tccggcacggtcacagacacgctctaccagggcgaaagcattcgggttttcgtgaagctc
gatgacggcggcgaaatgagcttccggcttcccagcaatcatgccggccgcgcgctgatg
aaatcgccaggcgaggcgataaccctcgcgctccacccggaagacacggtcatcgttccc
gaagcgggctga
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