Shinella oryzae: K6301_24885
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Entry
K6301_24885 CDS
T08112
Name
(GenBank) LysR family transcriptional regulator
Organism
soj
Shinella oryzae
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
HTH_20
HTH_30
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
UPA27120
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Position
pZ25:complement(1880679..1881593)
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AA seq
304 aa
AA seq
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MDLSLRILRYVVETADCGSITEAAKRMSVSQPSISAALAQMEAQLGIQLFVRHHARGVTL
SAAGQRFVNDARLLLNHARDFTQNAQSLGDALRGEIVVGSFPTLAIRFMPSLLSGFSRRY
PGISVKLEEGDQQEMISHLISGRTELALSYHFAVPDEITGEKLADLPPYALVSANHPLAS
RREISLAELEDEPFILLDLPHSRDYFFSLFEICGLSPQVAFRTRSSELIRGLVGHNQGYS
LHNVLPRTTVGYDGSKIAILPISEPLPPATVTFLRLARHEFRPAVQAFADYMRRAFATGG
MFAP
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggacttgtcgcttcggatccttcgctacgttgtcgagacggccgattgcggcagcatc
acggaagccgccaaacgtatgagtgtctctcaaccgtcgatctcggcggcgctggcgcag
atggaggcacagcttggcatccagttgttcgtccgacaccatgcccgtggtgtaacactg
tcggcggcggggcaacgtttcgtcaatgatgcgcgcctccttctcaatcacgctcgggat
tttacccagaacgcgcaatcgctgggcgacgccttgcgcggcgaaatcgttgtgggcagc
tttccgacactcgcgatccgcttcatgccgtccctgttgtcgggcttttcgcgccgctat
cctggaatttccgtcaagctcgaagaaggcgaccagcaggaaatgatcagccatctgatc
tccgggcgaacggagttggcgctgtcctaccactttgcggttccggacgagatcacgggt
gagaagcttgcagatctgccgccttacgcactcgtctccgccaatcatcccctcgccagc
cgccgggaaataagcctcgccgagctggaggacgagccattcatcctgctggacctgccg
cattcgcgcgactacttcttcagtctattcgagatatgcgggttaagcccacaagtcgcc
ttcaggacccgctcctcagagctgatccgtggcctcgtgggccacaatcagggctactcg
ctccacaatgtcttgccgcgcacgacggtcgggtatgacggcagcaagatcgcaattcta
ccgatctcggaaccactaccacctgcgacagtaacttttctgcggctggcgcgtcatgag
ttcaggcccgcagtgcaggcgttcgccgactacatgcgcagggccttcgccaccggcgga
atgttcgctccctga
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