Solimonas sp. K1W22B-7: D0B54_00550
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Entry
D0B54_00550 CDS
T05591
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sok
Solimonas sp. K1W22B-7
Pathway
sok03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D0B54_00550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sok03400
]
D0B54_00550
Enzymes [BR:
sok01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
D0B54_00550
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
D0B54_00550
DNA repair and recombination proteins [BR:
sok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
D0B54_00550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AXQ27268
UniProt:
A0A346MVD1
LinkDB
All DBs
Position
110242..111060
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AA seq
272 aa
AA seq
DB search
MPELPEVETVRRGVEPHVLGRRIGQVTVRDARLRWPVPKNLPALLRGRRVEATSRRGKYL
LLHLDNGDRLIVHLGMSGRLLVLQPGHPLRKHDHVDIELEGGVLLRYHDPRRFGAVLPWA
AAEQTHELLAGMGPEPFSEEFSGDYLFALSRGRSAPLKNFVMDGRVVVGAGNIYAAEALF
RAGLRPGRAAGRVTRAQYRLLADKIREVLAAAIEQGGTTLRDFAGADGESGYFQQKLYVY
GREGEACLVCGTTIRRMVIGQRSSCYCPECQA
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
gtgccggaacttcctgaggtagaaaccgtacgccgcggcgtcgagccgcatgtgctgggg
cggcgcatcgggcaggtcacggtgcgtgatgcccgcctgcgctggccggtgccgaagaac
ctgccggccctgttgcgggggcggcgtgtcgaggccacctcgcggcgcggcaagtacctg
ctgttgcacctggacaacggcgaccggctgatcgtgcacctgggcatgagcggtcgcctg
ctggtgctgcagccgggccacccgctgcgcaagcacgaccacgtcgacatcgagctggag
ggtggcgtgctgctgcgttaccacgacccgcgccgcttcggcgccgtgctgccctgggcc
gcggccgagcagacccatgaactgctcgccggcatggggccggagccgttctccgaggag
ttctccggggattatctcttcgccctgtcgcgcgggcgcagcgcgccgctgaagaatttc
gtgatggacggccgcgtcgtggtcggcgccggcaacatctacgccgccgaggcgctgttc
cgtgccggcctgcgcccgggccgcgccgccggccgcgtcacgcgtgcgcagtaccgcctg
ctggccgacaagatccgcgaggtgctggcggcggcgatcgagcagggcggcaccacgctg
cgcgattttgcgggcgccgacggcgaatccggctacttccagcagaagctctacgtctac
ggccgcgagggcgaagcctgcctggtctgcggcacgacgatccggcgcatggtgatcggc
cagcgctcctcctgttattgcccggagtgccaggcatga
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