Solimonas sp. K1W22B-7: D0B54_11140
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Entry
D0B54_11140 CDS
T05591
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sok
Solimonas sp. K1W22B-7
Pathway
sok03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sok00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D0B54_11140 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sok03019
]
D0B54_11140 (pnp)
03016 Transfer RNA biogenesis [BR:
sok03016
]
D0B54_11140 (pnp)
Enzymes [BR:
sok01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
D0B54_11140 (pnp)
Messenger RNA biogenesis [BR:
sok03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
D0B54_11140 (pnp)
Transfer RNA biogenesis [BR:
sok03016
]
Prokaryotic type
tRNA degradation factors
D0B54_11140 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
OB_RRP5_4th
KH_2
KH_SLS1_2
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
AXQ29208
LinkDB
All DBs
Position
2430911..2433019
Genome browser
AA seq
702 aa
AA seq
DB search
MAISAYPAAPVTKTFRYGNHTVSLQTGHMARQATGAVVVSIDDTVVLVTVVAKKEAKAEQ
DFFPLTVDYMEKFYAGGRIPGGFFKREGRPTEKETLTSRLIDRPIRPLFPEGYYNEIQLI
AQVVSLNPEVDGDIPALLGASAALALAGVPFQGPIGAARVGYKNGNYILNPNVSELVDSE
LDLVVAGTRDAVLMVESEADMLSEQVMLGAVLFGHEQMQAAITAINEFVAEAGKPKWDWK
AADRSAVQTFVAPFEGKIAEAYGFTDKQVRYGKLDEVTKAAKAARPTDGSLTDNQIKYEL
DELKAKIVRNRILDGHPRIDGRDKVTVRPLSINVGTLPRTHGSAVFTRGETQALAVVTLG
TGKDYQIMDAISGEWHEHFMFHYNFPPYSVGETGRLNSPKRREIGHGRLAKRGVAAVMPD
LEKEFPYVVRVVSEITESNGSSSMASVCGSSLALMDAGVPIKAPVAGVAMGLILEEGRWA
VLTDILGDEDHLGDMDFKVAGTQDGITALQMDIKVAGITGEIMAQALKQAKDARLTILAQ
MNEVLPKARTELSMHAPRITMIKIHPDKIREVIGKGGATIQAITRETGTSIDIDDDGTIK
VAAVDGKAAEAAIARIQALTRDVEVGAIYEGKVAKIMDFGAFVTITPGKDGLVHISQLAD
KRVEKVEDVVKEGQVVKVKVLEVSKDGKIRLSMKALDLETPA
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggcgatctccgcctatcctgcagcgcccgtcaccaagacgttccgctatggcaaccac
accgtcagcctgcagaccggccacatggcccgccaggctaccggcgccgtcgtcgtcagc
atcgacgacaccgtcgtgctggtcaccgtggtcgccaagaaagaagccaaggccgagcag
gatttcttcccgctcacggtcgactacatggagaagttctacgccggcggccgcatcccg
ggtggcttcttcaagcgtgaaggccgtccgaccgagaaggaaaccctgacctcgcgcctg
atcgaccgcccgatccgcccgctgttcccggagggctactacaacgaaatccagctgatc
gcccaggtggtctcgctgaacccggaagtcgacggtgacatcccggcgctgctcggcgct
tccgccgcgctggcgctggccggcgtgcccttccagggcccgatcggcgccgcccgcgtc
ggttacaagaacggcaactacatcctcaacccgaacgtctccgagctggtggattccgag
ctcgacctcgtcgtcgccggcaccagggacgccgtgctgatggtggagtccgaggccgac
atgctgtccgagcaggtcatgctcggcgccgtgctgttcggtcacgagcagatgcaggcc
gcgatcaccgcgatcaacgaattcgttgccgaagccggcaagccgaagtgggactggaag
gccgccgatcgctcggccgtccagaccttcgtcgcgcccttcgagggcaagatcgccgaa
gcctacggcttcaccgacaagcaggtccgctacggcaagctcgacgaagtgaccaaggcc
gccaaggccgcgcgtccgaccgacggcagcctgaccgacaaccagatcaagtacgaactg
gacgagctcaaggccaagatcgtgcgcaaccgcatcctcgatggccatccgcgcatcgac
ggccgcgacaaggtcaccgtgcgtccgctgtcgatcaacgtcggtacgctgccgcgcacc
cacggttcggccgtgttcacccgtggcgagacccaggccctggccgtggtcaccctgggt
accggcaaggactaccagatcatggacgccatcagcggcgagtggcatgagcacttcatg
ttccactacaacttccctccgtactcggtgggcgagaccggccgtctgaactcccccaag
cgccgcgagatcggccatggccgcctggccaagcgcggcgtcgccgccgtgatgccggac
ctcgagaaggaattcccgtacgtggtgcgcgtggtttcggaaatcaccgaatccaacggt
tcctcgtcgatggcctcggtctgcggttccagcctcgcgctgatggacgctggcgtgccg
atcaaggcgccggttgccggcgtggcgatgggcctgatcctggaagaaggccgctgggcg
gtgctcaccgacatcctcggtgacgaagaccacctcggcgacatggacttcaaggtcgcc
ggcacgcaggacggcatcaccgcgctgcagatggacatcaaggtcgccggcatcaccggc
gagatcatggcgcaggccctcaagcaggcgaaggacgcccgcctgacgatcctggcgcag
atgaacgaagtgctgccgaaggctcgcaccgagctgtcgatgcacgcgccgcgcatcacc
atgatcaagatccacccggacaagatccgcgaagtcatcggcaagggcggcgcgaccatc
caggcgatcacccgcgagaccggcacctcgatcgacatcgacgacgacggcaccatcaag
gtggccgcggtcgacggcaaggctgccgaggcggcgatcgcccgcatccaggccctgacc
cgcgacgtcgaagtcggcgcgatctacgaaggcaaggtcgccaagatcatggacttcggt
gcattcgtgaccatcaccccgggcaaggacggcctggtccacatttcccagctcgccgac
aagcgcgtggagaaggtggaagacgtggtcaaggaaggccaggtcgtcaaggtcaaggtc
ctggaagtcagcaaggacggcaagatccgcttgtcgatgaaggccttggacctggaaacg
ccggcctga
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