Solimonas sp. K1W22B-7: D0B54_19780
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Entry
D0B54_19780 CDS
T05591
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
sok
Solimonas sp. K1W22B-7
Pathway
sok02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sok00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D0B54_19780
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sok02022
]
D0B54_19780
02035 Bacterial motility proteins [BR:
sok02035
]
D0B54_19780
Two-component system [BR:
sok02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
D0B54_19780
Bacterial motility proteins [BR:
sok02035
]
Pilus system
Twitching motility proteins
D0B54_19780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
Mg_chelatase
HTH_30
HTH_50
VpsR
HTH_28
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AXQ30786
LinkDB
All DBs
Position
4390449..4391768
Genome browser
AA seq
439 aa
AA seq
DB search
MKGAAALIVDDEADIRELVEITLSRMGLKTRSAATLQDARRLLGEQAFDFCITDMRLPDG
NGVSLVQHIQKQYPQMPVAVITAYGSSQAAVESLKAGAFDFVSKPVDLQSLRKLVDAALK
LRNRDDKPASDDGGLLGEHESVRQLRGMIERLARSQAPVHIAGESGTGKELVARLIHNRG
PRASGPFTPVNCGAIPSELMESEFFGHLKGSFTGALKDKPGLFQAAEGGTLFLDEVADLP
LHMQVKLLRALQERAVRPVGSESEVAVNVRIISATHKNLGDLVARGAFRQDLFYRLNVIE
VGTPPLRDRACDIPLLADSILARLAQEIALPSSPTLDAGAKAALKAYPFPGNVRELENIL
ERAITLCDGEQITALDLQLRNLPGGAPAGGALEDQMEDIERKAIQEALEKARFNKTKAAE
LLGMSFRSLRYRIKKLGIE
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcgcagccgcactgatcgtcgacgacgaagccgatatccgcgaactggtggag
atcaccctgtcgcgcatggggctcaagacccgttccgccgccaccctgcaggacgcccgc
cgcctgctgggcgagcaggccttcgacttctgcatcaccgacatgcgcctgcccgacggc
aacggcgtcagcctggtgcagcacatccagaagcagtacccgcaaatgccggtggcggtg
atcaccgcctacggcagttcccaggcggcggtggagagcctcaaggctggcgccttcgac
ttcgtctccaagccggtggacctgcagtcgctgcgcaagctggtggacgcggcgctgaag
ctgcgcaaccgcgacgacaagccggccagcgacgacggcggcctgctgggcgagcacgaa
agcgtgcgccagctgcgcggcatgatcgagcgcctcgcgcgcagccaggcgccggtgcat
atcgccggcgagtccggcaccggcaaggaactggtggcgcgcctgatccacaaccgcggc
ccgcgcgcctccggccccttcaccccggtcaactgcggcgcgatcccctccgagctgatg
gaaagcgagttcttcgggcacctgaaaggcagcttcaccggcgcactcaaggacaagccc
ggcctgttccaggcggccgagggcggcaccctgttcctcgacgaggtcgccgacctgccg
ctgcacatgcaggtcaagctgctgcgcgccctgcaggagcgcgccgtgcgcccggtgggc
agcgagtccgaggtggcggtcaacgtacgcatcatctccgccacccacaagaacctcggc
gacctggtcgcccgcggcgccttccgccaggacctgttctaccgcctcaacgtgatcgaa
gtgggcacgccgccattgcgcgaccgcgcctgcgacatcccgctgctggccgacagcatc
ctcgcccgcctggcgcaggagatcgccctgccgtccagcccgacgctggacgccggcgcc
aaggccgcgctcaaggcctatcccttcccgggcaacgtgcgcgagctggagaacatcctg
gaacgcgccatcaccctctgcgacggcgagcagatcaccgccctggacctgcagctgcgc
aacctgcccggcggcgcccccgccgggggcgcgctggaagaccagatggaagacatcgag
cgcaaggcgatccaggaggccctggaaaaggcgcgcttcaacaagaccaaggcggcggaa
ctgctggggatgagcttccggtcgctgcggtatcggattaaaaaactgggaatcgagtaa
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